Nematolebias whitei (Rio pearlfish): 119417526 Help Entry 119417526         CDS       T08042                                  Symbol col2a1a Name (RefSeq) collagen, type II, alpha 1a   KO K19719   collagen type II alpha Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh04510   Focal adhesion nwh04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:nwh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     119417526 (col2a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     119417526 (col2a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nwh00536]     119417526 (col2a1a) Glycosaminoglycan binding proteins [BR:nwh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    119417526 (col2a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  119417526 NCBI-ProteinID:  XP_037540675 LinkDB All DBs Position 11:21242687..21264335 Genome browser AA seq 1418 aa AA seqDB search MFSFVDSRTVLLLVASQVVLLSVVRCQEEDDQTVGVKGQKGEPGEIADVVGPRGPAGPMG PPGEQGPRGEAGAKGDKGNPGPRGRDGEPGTPGNPGPAGPPGPPGLGGNFAAQMAGGFDE KAGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGSPGEAGESGPAGPMGPRGPPGPSG KPGSDGESGKPGKPGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKGETGAAGAKG ETGAAGENGAPGSMGPRGLPGERGRPGAAGSAGARGNDGLPGPAGPPGPVGPVGAPGFPG SPGAKGEAGPTGVRGAEGQQGPRGEAGTPGSPGPAGAGGNPGTDGIPGAKGSAGAPGIAG APGFPGPRGPPGPQGATGTLGPKGQSGDPGLPGLKGESGPKGELGPAGPQGPPGPAGEEG KRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVAGAVGPKGATGDPG RTGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPLGARGQPGVMGFPGPKG ANGEPGKAGEKGLIGRPGLRGLAGKDGETGPAGPHGPTGPAGERGEQGQPGPPGFQGLPG PTGSPGEAGKPGDQGVPGEGGAPGAVGPRGERGFPGERGGAGPQGLQGPRGLPGTAGTDG PKGAIGPAGAPGSQGPPGLQGMPGERGAGGIPGAKGDRGDNGQKGPEGASGKDGARGLTG PIGPPGPSGPNGVKGENGPTGPIGAPGVRGAPGDRGELGPPGPAGFAGPPGADGQPGAKG EHGESGQKGEAGASGPQGPSGAPGPVGPTGVSGPKGARGAQGPPGTTGFPGAAGRVGSPG PNGNPGSVGPAGPAGKDGPKGVRGDAGPPGRAGDAGLRGPAGPPGEKGEPGEDGPPGSDG PSGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGASGGAGDRGPPGPVGPPGLTG PAGEPGREGTPGSDGPPGRDGALGVKGERGNTGPAGAPGAPGAPGGPGPVGPLGKQGDRG EAGAQGPAGPPGLAGARGMAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPAG DSGASGPAGPSGAKGPPGPVGPAGKDGSNGQPGPIGPPGPRGRSGETGPSGPPGNPGPPG PPGPPGPGIDISAFAGLGQTEKSPDPLRYMRADEASSSQRQHDVEVDATLKSLNNQIETL RSPDGTQKNPARTCRDLKLCHPEWKSGDYWVDPNIGSTADAIKVFCDMETGETCVYPSIA KVPRKNWWTSKGNDRKHVWFGESMNGGFHFNYAQSGPAAIAASVQLTFLRLLSTEASQNL TYHCKNSIAYMDQATGNLKKALLLEGSNDVEIRAEGNSRFTYSVLEDGCKSHTGRWGKTV FEYKTQKTSRLPIVDIAPMDIGGAEQEFGVDVGAVCFL NT seq 4257 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggactcaagaactgttctgctacttgtagcatcccaagtagtttta ctatctgtggtcagatgtcaggaggaggacgaccagacagtcggtgttaagggccagaaa ggagaaccaggagagattgcagatgttgtaggaccaagaggaccagctggcccaatgggt cccccaggtgagcaaggaccacgtggagaagctggcgctaagggtgataagggaaatcct ggacctcgagggagagacggtgaacccggcacacctggaaaccctggccccgctggccca cctggaccaccagggctgggaggtaactttgctgcccagatggctggaggctttgacgag aaggctggaggagctcagatgggagtgatgcagggacccatgggccccatgggcccccgt ggtccccctggaccttctggatctcctggaccacaaggtttccaaggttcccctggagag gctggagagtctggtccagctggaccaatgggacctcgtggaccacctggaccatctgga aaaccaggaagtgatggtgaatctggcaaacctggcaaacctggtgagcgtggacctgca gggcctcagggagctcgtggattccctggaactcctggacttcctggaattaaagggcac agaggtcatcctggtctggatggagctaaaggagagacgggagctgcaggagccaagggt gagactggtgctgccggagagaacggtgcccctggatcgatgggcccacgtggtctgcct ggtgagaggggacgtcctggagctgctggatctgcaggtgctcgtggaaatgatggcttg cctggtcctgctggtccccctggcccagttggtcctgttggggcacccggtttcccagga tccccaggagctaagggagaagctggtcccactggtgtccgtggagctgagggacaacag ggtccccgcggagaagctggtacaccaggatctcctggaccagccggagcagggggtaac ccaggtactgacgggatccctggagccaaaggatctgctggtgctcctggtattgctggt gctcctggattccccggccctcgtggaccacctggacctcagggagcaactggaactctg gggcctaaaggacagtctggagatcctggtctgcctggattgaagggagaatctggacca aaaggggagcttggccctgctggtcctcaaggtccccctggtcctgctggagaagaagga aagagaggcgccagaggagaacctggagctgctgggccactaggacctccaggagaaaga ggcgctccaggaaaccgaggtttccctggtcaggatggtctggcaggagcgaagggtgcc cctggtgatcgtggtgtcgctggcgctgttgggcctaaaggtgctacaggagaccctgga cgcacaggagagtctggtcttcctggagccagaggactcactggtcgtcctggagatgct ggtcctcaaggcaaagttggaccctctggggcccctggtgaggacggtcgcccaggtcct cctggtcctctgggagcacgtggacagcctggagtgatgggattccctggaccaaaggga gccaatggtgaacctggaaaagcaggagagaaaggacttataggccgtccaggtctgaga ggtctggctggaaaagatggtgagaccggacctgccggacctcatggccctactggaccc gctggagagagaggagagcaaggccagcccggacctcctggcttccagggtctgcctgga ccaactgggtccccaggagaggctggaaaaccaggagatcagggcgttcctggagaaggt ggagctcctggcgctgttggacccagaggtgagcgcggattccctggcgaaagaggtggt gctgggcctcagggtcttcagggacctcgtggacttcctggaacagcaggaactgatgga cccaagggagcaatcggaccagctggagctcctggatctcaaggaccccctggtctgcag ggtatgcctggggagagaggagccggcggtatcccaggagccaagggagacagaggtgac aacggacaaaagggacccgagggtgcttctggaaaggatggtgcgaggggtttgactggt cctattggtcctcccggcccatctggacccaacggtgtcaagggtgagaatggacctact ggacctattggtgctcctggtgttcgtggtgctcctggtgatcgtggtgagctcggtcct cctgggcccgctggctttgctggacctcctggtgcagatggtcagcctggtgccaaggga gagcacggtgagtccggacagaagggagaagctggtgcctctggacctcagggaccatct ggagctcctggacctgtgggacctactggcgtatctggacctaagggagcacgtggtgct cagggacctcctggaaccactggtttccctggtgctgctggtagagttggatctcctggt cctaatggtaaccccggttctgttggtcctgctggccctgctggtaaagacggtccaaag ggtgtacgtggcgatgccgggcctccaggcagagcaggagacgcaggccttcgtggaccc gccggccctccaggagagaaaggagagcctggagaggatggaccacctggttctgatggg ccttcaggtcctcagggtctggcaggatctcgtggtattgttggtttgcctggtcagcgt ggagagaggggcttccctggcctccctggaccttctggagagcctggcaaacagggagcc tctggtggtgctggtgaccgtggacctcctggacctgtaggacctcctggacttactgga cctgctggagaaccaggcagggagggcactcctgggtcagatggacctcccggtagagac ggtgctcttggagtcaagggagagcgaggtaacactggacctgctggcgctcctggagct cccggagctcctggtggacctggacctgtcggacctctcggcaagcagggagacagagga gaggctggcgctcaaggacctgcaggacccccaggactagctggtgcacgaggaatggct ggaccccaaggaccacgtggagacaaaggagaggctggtgaggctggagagaggggtcaa aagggtcaccgtggcttcaccggtctgcagggtcttcctgggcccccaggtcctgctgga gactctggagcttccggacccgctggaccaagtggagcgaagggaccacctggaccagtt ggacccgctggcaaagacggatccaatgggcaacctggccccatcggacctcctggacct cgtggacgttctggagaaactggtccttctggtcctcctggtaaccctggaccccctggt cctcctggaccaccaggcccaggcattgatatctctgcctttgctggcctgggtcaaact gagaagtcccccgatcctctcaggtacatgagggcagacgaggcttccagctcccagagg cagcatgatgttgaggtcgatgccacactcaagtccctcaacaaccagatcgagaccctg cgcagtcctgacggcacccagaagaaccctgcccgcacctgcagagacctcaaactgtgc caccctgagtggaagagtggtgattactgggttgatcccaacatcggcagcacagcggac gctattaaggtcttctgtgacatggagacaggagagacctgtgtctacccaagcatcgcc aaggtaccaaggaagaactggtggaccagcaagggcaacgaccgcaaacacgtctggttc ggagagtccatgaatggaggattccacttcaactatgcccaatccggccctgctgccatc gctgccagcgtccagctcaccttcttgaggcttttatccactgaagcatcccagaacctc acgtatcactgtaaaaacagcattgcctacatggatcaggccacaggaaacctgaagaag gctttgctgctggaaggctccaacgacgtggagatccgtgcggagggcaacagtcggttt acttacagcgtgttggaggacggctgcaagagtcatacaggccggtggggcaagactgtc tttgagtacaaaacacagaaaacctcccgtctgccaatcgtagacattgcacctatggac atcggaggagcagaacaggagttcggagtggatgtaggcgccgtctgcttcttgtaa

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