Nematolebias whitei (Rio pearlfish): 119417550
Help
Entry
119417550 CDS
T08042
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119417550 (apex2)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119417550 (apex2)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119417550 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
119417550
NCBI-ProteinID:
XP_037540710
LinkDB
All DBs
Position
11:23789175..23792681
Genome browser
AA seq
541 aa
AA seq
DB search
MKVVTWNINGIRTFKAGIKQTLDCLDADIVCVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCQDSATPCAAEEGLTGLLTNHQGAVGSYGDLSDFSNEELQLLDNEGRAV
ITQHKIMCENKERTVTLINVYCPRADPEKPKRKQFKLQFYKLLQRRAEALLKDGSHVIIL
GDVNTSHRPTDHCDPTDIDDFAENPGRKWLNAFLHSSNQEENRDEAGPETESEVKDPVRQ
GKFIDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCRLVVEQFVAADIMPEVE
GSDHCPVWAQLNCPLLPSSKPPPLCTRYLPEFVGKQQKLSLFLVKVDQKQTQLEQKCVLP
GSQEEEERRENLNPVRVDKISGKKRSLISDSAVPKGKKSKTANTSVKPQGNLLSFFKPKP
TNNKPCEKASTTGFDGSAQLCSSSATVETGQPVKTNNSTSQPTVGQSDVRKTASLGFWKS
VLHGPPPPPSCKVHREPCVLRTVKKEGPNVGKQFFVCCRPQGHASNPEARCNFFTWVDKG
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcacttggaacataaacggtataaggacttttaaagccgggatcaaacag
actcttgattgtctggacgcagatatcgtctgtgttcaggagacaaaagtgacaagagac
ctgctggatgaaaggactgccattgttgacggctacaactcctatttcagctacagtcga
ggacgcagcggctattcaggggttgccacttactgtcaggacagtgccactccatgtgca
gctgaggaaggtctcacaggcctgctgaccaaccatcaaggtgctgttggatcctatggt
gacctgtctgacttttcaaatgaggagctgcagcttttagacaacgaaggacgagccgtc
atcacacagcacaaaatcatgtgtgagaacaaagagcggactgttactttaattaatgta
tactgtcctcgagctgaccctgaaaaaccaaagcgaaagcagttcaagctacagttctac
aagctgcttcagagacgagctgaagctttgctaaaagacgggagccatgtgatcattctt
ggagatgtgaatacgtctcatcgaccaacagaccactgtgatcccactgatattgatgac
tttgctgaaaacccggggagaaaatggctaaatgcctttttgcacagcagcaaccaagaa
gagaaccgtgatgaagctggtcctgaaacagaatcagaggtaaaggatcctgtccggcaa
gggaaatttattgatacctttcgctatttccacccaactcgtacaaatgccttcacgtgt
tggtccactctcactggagcccggcagactaactacggcacacgcatcgactatatattt
gcggattgtcggctcgttgtagagcagtttgtggcagcagacatcatgccggaggtggag
gggtccgaccactgtcctgtttgggcacaactgaactgccctctccttcccagctccaag
ccccctcccctctgcactcgctatctgccggagtttgtcggcaagcaacagaaactctcg
ctcttccttgttaaggtggaccaaaaacaaactcagcttgagcagaagtgtgtcttacct
ggttctcaagaagaggaggaaagaagggagaacttaaacccagttcgagttgataaaatc
tctggtaagaaacggtcattaatttcagactctgctgtcccaaaggggaaaaagagcaaa
acagcaaatacctctgtaaagccacaaggcaaccttctttcatttttcaagcctaaaccc
acaaataataaaccatgtgagaaggcatccacaactggttttgatggttcagcccagctg
tgctccagcagcgccacagtggaaactggccaaccagtgaagacaaataattcaacctct
cagcccactgtgggacagtcggatgtaaggaaaacagcatcactgggattttggaagtct
gtgcttcatggtccacccccacccccatcctgtaaggtccacagagaaccctgtgtgctc
cgtacggtgaaaaaagagggaccgaatgtgggcaaacagttctttgtgtgctgccgtcct
cagggacatgcctccaaccccgaggctcgatgtaatttcttcacgtgggttgacaaagga
aagtga
DBGET
integrated database retrieval system
