KEGG   Nematolebias whitei (Rio pearlfish): 119417559
Entry
119417559         CDS       T08042                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nwh01009]
    119417559 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nwh03036]
    119417559 (kdm5c)
Enzymes [BR:nwh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119417559 (kdm5c)
Protein phosphatases and associated proteins [BR:nwh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119417559 (kdm5c)
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119417559 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_UBR7-like
Other DBs
NCBI-GeneID: 119417559
NCBI-ProteinID: XP_037540723
LinkDB
Position
11:complement(24113593..24140552)
AA seq 1579 aa
MEAEEFIPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPTDWQPPFSVELDT
FRFTPRIQRLNELEAETRVKLNYLDRIARFWEIQGSSLKIPHIERRIVDLYSLSKNVTDE
GGFEMVCKERRWARIAQRLGYPPGKNVGSLLRSHYERIVYPFEMFQSGASLLHYKPKHYD
GEDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLAPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGLRKKDELPQTVTIKDNELPASSESLIK
SEPLEPEERLADGGTSSPQLPHHSATVKMEVKKEELHGENDKNGDDPDGSKMTMRLRRNP
NNPQCVDSFICRMCGRGDDDDKLLQCDSCEENYHSYCLLPPLSDIPKSNWRCPKCVAEEC
KKPSEAFGFEQATREYSLQSFGEMADAFKADYFNMPVHMVPPELVEREFWRLVSCIEEDV
TVEYGADIHSKEFGSGFPMMNGKKNLTKEEEDYARSGWNLNVMPVLEQSLLCHINGDISG
MKVPWLYVGMVFSTFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEQLEGVMNKLTPEL
FEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN
FCTADWLPAGRHCIEHYRRLRRYCVFSHEELTCKMAASPEKLDLNLAAATHREMFIIVQE
ERKLRKNLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSNCPEHLVCLYHTQD
LCNCPTEKLYLRYRYTLDELLAMLHRLKVRSESFDSWANKVKETLEQEDGNKIEMYDLEK
LKMEAAEKKFPDNELLRKLNSVLIDITYCQQTSAELLNDSKTGEGRITFQELKSLVEKMQ
SLPCVMNQLEEVQVVLRTVEDFQKRAQVLINNKDWRKDTPPPEQLQSLLEEGAKLPVVAP
ECDLLQGLKKQGHWLEEVRCTLGSAGGEKHEVTLDVLRNLMEAGCNVPQSGSVETAMAEL
QELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILALQSCLVRARAWV
TDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQLELQVASAHSWRDKATKTFLKKS
SQHTLLEVLCPCAKRRTKRVETEPLEDDSDTNTLGLSAQALRDPAAIVMAFKEGEHQEKE
ALLRLQEVNMCKSGLSTASCKENRQWHEAMETDTSGHCENSVTENGNGDHSRPSPQSVCA
GQTRAPQLRCHLCKDWFHGGCVPCPPLLPSSGPPINYLCWWDWDTRFLCPQCQRSRRPRL
ETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEALETPELQQVLQKLQELKETL
HYNAEEEEEEKKEPQGNSVIILSDSEGGEGDDEVIDLTEESPKKKVKENSATQAECQNGV
GKKSNVTSVSSLLALLPLLKGHVVELSPATRVQLEELQLEGDLLEVSLDQTQTIYRVLHA
ASDPPRETLHTLIQIELDEQRRTRRARPKESKRKRKGHRGSSGEGSGEKSLDVSQSKKTC
PLTLSPSAPLPVKTHPEML
NT seq 4740 nt   +upstreamnt  +downstreamnt
atggaagcagaagagtttattcctcctccggagtgtcccgtttttgagccgtcatgggag
gagtttcaggatcccttgggctacatcgccaaaatacgtccaattgcagagaagtctgga
atctgtaaaattcgtcccccaacagactggcaaccaccattttcagttgagctggacacc
tttcgctttacacctcgcatccagaggcttaatgagttggaggctgagaccagagtaaag
ctcaattatttggaccgcatcgccagattttgggagattcaagggtcttctttaaaaatc
ccacatattgaaaggcgaattgttgatctttacagcctgtcaaagaatgtgacagatgag
ggggggtttgagatggtctgtaaggagcggcgctgggctcgtatagctcagaggcttggc
taccctccaggcaagaacgttggctctctcctgcgctcacactatgagaggattgtctac
ccatttgaaatgttccagtctggggccagccttctgcattacaagccgaagcactacgat
ggtgaagatgtggataaagagtacaagcctcactcgatcccgttgagacagtctgtgcag
ccgtccaaaatgagcagttatggacgcagagcgaaccggtgccagcctgatggtccagag
gatctggccccccatcctctcaccactggctctcaactcatctctgcgcctgaacctaca
gaggaggacatcgagaagaaccccgagttgaagaaattacagatctacggtgcggggcct
aagatgatgggacttgggctggtggcgagggacaaaggtcttaggaagaaagatgagctg
cctcaaactgttaccatcaaagacaacgagttgcccgcctccagtgagtcactgatcaaa
tctgagccactggagcctgaagagagactggctgatggaggcacatccagcccacagctg
cctcatcacagtgctacagtaaagatggaggtgaagaaagaagagctgcacggtgagaat
gacaagaatggagatgatccagacggatccaaaatgaccatgaggctaagacgcaacccc
aacaacccacagtgtgtggattcttttatctgccggatgtgtggtcgtggagatgacgac
gacaaacttcttcagtgtgacagttgtgaggagaactatcactcttactgtctgctgccc
cccctctctgatatccccaaatccaactggcgatgcccaaaatgtgtcgcagaagagtgc
aagaaaccttcagaggcattcggctttgaacaagcgacgagagagtactctctgcagagc
tttggagaaatggcagatgccttcaaagcagattacttcaacatgcctgtccatatggtt
ccccctgagctcgtggagagagagttctggaggttagtgagctgtattgaagaagacgtg
actgtcgagtatggagcagacatacactctaaagagtttggcagtggctttccaatgatg
aacgggaaaaagaatctcacaaaggaagaggaggattatgcccgcagtggctggaacttg
aatgtgatgccagttctggagcagtcgctcctctgccacatcaatggagacatctctggg
atgaaagtgccgtggctttacgttggcatggtgttttcaactttctgctggcatattgag
gatcactggagctactccatcaactaccttcactggggagaacccaaaacttggtatgga
gttccctctgtggcagctgagcagcttgagggtgttatgaataaactaacaccagagctg
tttgagttccagcctgacctcctgcatcagctggttaccatcatgaaccccaatatcctc
atggctcacggcgtaccggttgtacgcacgaaccagtgtgctggtgaatttgtcatcacc
ttccccagagcctaccacagtggcttcaatcagggatataactttgcagaagcagtcaac
ttctgcactgcagattggctccctgctggccgacactgtattgagcactatcggcgtttg
aggaggtattgtgtcttctctcacgaggagctcacctgtaaaatggctgccagtccagag
aaactggatctcaacctggctgcagctactcatcgggagatgttcatcattgttcaggag
gagagaaagctgcgcaagaatctgatggaaaggggcattactgaagcagaacgggaggca
tttgagctgctccctgatgacgagaggcagtgtgataaatgtaaaaccacgtgcttcctg
tctgctctggcctgctcaaactgccccgaacatctcgtgtgtctctatcacactcaggat
ctgtgcaactgccccactgaaaaactctacctcaggtacagatacaccttggacgagttg
ttggcgatgttacatcgattaaaggtccgatccgaatcttttgattcctgggccaacaaa
gtgaaagagacacttgaacaggaagatggaaacaagatagaaatgtacgaccttgagaag
ctgaagatggaagcagcagaaaagaaatttcctgacaacgaacttctcaggaagctgaac
tctgttctgatagacataacctactgccaacagacgagtgctgagctcctcaatgattca
aaaactggtgaaggcagaataacctttcaggagctgaaatctttggttgagaaaatgcaa
agcctgccctgtgttatgaaccagttggaggaagttcaggtggttttgaggacagttgaa
gatttccaaaaacgagctcaagttctgatcaacaataaggactggaggaaggacaccccc
ccacctgagcagctgcagtctttattggaggaaggggccaagctgcctgtggtggctcca
gagtgtgatttacttcagggcctgaagaagcaaggccattggctggaggaggtgaggtgc
acgcttggctctgcaggaggagagaagcacgaagtgacactggatgtgttgaggaacctg
atggaggcgggctgcaacgtaccccagagcgggtctgtagagacggccatggctgagctt
caagaactgctcaccattgctgaacggtgggaggaaaaggcacagatctgcttagaacag
aggcaaaaacatcctctctccacgttggaggccatagtaaatgaggcccagcttattcct
gtcaagcttcccaacatcctggctttgcagagctgtcttgtacgagctcgggcctgggta
acagatctggaggaaatacagaatggggagcattacccatgtttggatgacctggaaggc
ctggtagccattggaagggacctcccagttttcatggaagagttaaggcagctggaactg
caagtggccagtgctcactcttggagggacaaggccaccaagaccttcctgaagaagagc
agccagcacactctactagaggtgttgtgtccgtgtgcaaaaaggagaactaagcgagtc
gagacagagcccttagaagatgattcagatacaaacacgctggggctctccgctcaggcc
ttaagggaccctgcagctattgtgatggcgttcaaagaaggagaacaccaggagaaggag
gccctgctgaggttacaggaagtgaatatgtgcaaatctggactgagcacagcgagctgc
aaagagaacaggcagtggcatgaggccatggagacggacacatcaggccactgtgagaac
tctgtaacagagaatggaaacggtgaccacagccggcccagccctcagtctgtgtgtgct
gggcagactcgtgctcctcagctccgctgccatctttgtaaggactggttccatggtggc
tgtgttccttgtcctcctctgctgccctcttctggaccaccaatcaactacctttgttgg
tgggactgggacacccgcttcttgtgtcctcagtgccagcggtcgcgacgcccacgtctg
gagactatcctggctttactggtagccctgcagaggttacctgtgcgtctgcctgaagga
gaggctctgcagtgtctcacagagagggccatcacctggcagggccgagccaaagaggcg
ctggagacgcctgagctgcagcaggtgctgcagaagctgcaggaactcaaagaaaccctc
cactataacgctgaagaagaggaagaggagaagaaggagccacaggggaattcagttatt
attttatcagactccgagggaggggagggagacgatgaagtcatcgacctaacagaggag
tcacctaaaaagaaagtaaaggagaacagtgccactcaggccgaatgtcaaaatggtgtc
ggcaagaagtcaaatgttacaagtgtgagctctctgctggccctgctgcctttactgaaa
ggccacgtggtggagctttccccagccaccagggtgcagctggaggagctgcagctagag
ggcgacctactggaggtgtctttggatcaaacccagaccatctacagagtcctgcacgca
gcctccgacccacccagagagactctgcacacactcatccagattgagctggatgagcag
aggcggacgagacgagcacgacccaaagagtccaaaaggaagaggaaaggccacagagga
agcagcggagaagggtcaggagaaaagtcacttgatgtctcgcagtcaaagaaaacctgt
cccctcactctcagcccctctgctcccctccccgtcaagacccatccagagatgttgtga

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