Nematolebias whitei (Rio pearlfish): 119417615
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Entry
119417615 CDS
T08042
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119417615 (calcoco1a)
04131 Membrane trafficking [BR:
nwh04131
]
119417615 (calcoco1a)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
119417615 (calcoco1a)
Membrane trafficking [BR:
nwh04131
]
Autophagy
ER-phagy
ER-phagy recepters
119417615 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
119417615
NCBI-ProteinID:
XP_037540788
LinkDB
All DBs
Position
11:30468141..30480172
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AA seq
649 aa
AA seq
DB search
MDKTWRVEFRNVGCTYFPQSRVDCHYTISSLHSWASSDWIGLFKVGWTSANDYETFVWAL
APTDYEEGTDVNCCVQFQACYLPKPSSQEYEFVYVDSKGEVCSRSSKFSFCAPKPLEDLV
TLEEESHGEDESTDMLLVIPRAELLQSRLQECLQKQAELLQKQEVAKRQKEEERERNKRA
KEAWDRQRRGLERDIAWLKEELTQSQKTIEEIERKQKEERALGESLSLEKTALMNSKEAS
DMQIRELEVDVRTLTQRAVERETELERMKERAKRAAALRKEEEIERKSLQTKLEQTEAEL
RSLSKEFQSLRNSLAQRDTSVLQLQNTITTLTQKLTTAHRKEAESEASLKEMRSLRGRLH
MSERTAEGLKRDLSAMVAQRDHGQAELHQAQLQAARLAIQLADVSMTLRKDSAHWEEERE
NLQRSVEMDKKRLEKLNMEFQRIEEKLQEEKMERVKQEVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKELLQAEKQELMEYICQLEQKMGTVTTARWDAAPIASTGPDAALSDSD
DGSPEAVQILQSPRALGHYSLCEQGQPDSLLLSTPPPSPRDMDRSAVVINQPAPLSLPHQ
ATANTLAHSSDSEEESDPVQCGRKSSAEEMAHFLPEYDTVLSDLDSPLW
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacttggcgagttgagtttagaaatgtgggctgcacttacttccctcagagc
agagtggattgtcactacactataagctcactgcacagctgggccagcagtgactggatt
ggactcttcaaggtgggatggacatcagcaaatgactatgaaacatttgtttgggccttg
gctccaactgactatgaagagggcacagatgtcaactgctgtgtgcagttccaagcctgc
tacttgcccaagcccagctcccaagagtatgagtttgtatatgttgacagtaaaggggag
gtgtgctcccggagctccaagttcagtttttgtgctccaaagccacttgaagatctggtg
acccttgaggaagagtcccatggtgaagatgaaagtacagacatgctgttggtaataccc
agggccgaactgctgcagagtcggctgcaggagtgtctgcagaagcaagctgagcttttg
caaaagcaggaagtggcaaaaaggcaaaaggaggaagagagagagagaaacaagagggcg
aaggaggcatgggacagacagcgcagagggctggaacgtgatattgcctggctgaaagaa
gagctgacacagagtcaaaaaacaattgaggaaatagaaaggaagcagaaggaggagcgg
gctttaggagaatcacttagcctggaaaaaactgcattaatgaattccaaggaggcgagt
gacatgcaaataagagagctggaggtggatgtcagaaccctaacacagagagctgtggaa
agagagacagagttggagagaatgaaggaaagagccaaaagggctgccgccttgagaaaa
gaagaagagattgaaaggaagagcctgcagactaagctggagcagacagaagctgagctc
agaagtctgtctaaggagtttcagagtcttaggaactccctcgcacagagagacaccagc
gtgctgcaactccagaacaccatcaccaccctcacacagaaactcaccactgcccacagg
aaggaggcagagagtgaagcatcgctgaaagagatgaggagtctgcgggggcgtctccac
atgagtgagcgcaccgcagaaggcttaaagagagatctcagcgccatggtggctcagagg
gatcacgggcaggccgaactgcaccaggctcaactccaggctgcacggctcgccattcaa
ctcgcagatgtcagtatgaccctgagaaaagacagcgcccactgggaggaagagagagaa
aatctgcagcgctctgttgagatggacaagaagcgcttggagaaactcaacatggagttt
cagaggattgaagaaaaactgcaggaggaaaagatggaaagagtaaaacaggaagttgag
cttggaagagaaaaagactgcaatagggttcagctgagtgaaacccggagggagcttcaa
gagctgaaagccagcctgagggtggcccagaaggagaaggaactgctacaagcagagaaa
caggagttgatggagtacatctgtcagctggagcagaagatgggaacagtgaccactgcc
aggtgggacgctgctccgattgcctccacaggtcccgacgctgccttatcggactcagat
gatgggagtccagaggctgtacagatcctccaatcaccaagagctctgggacactacagc
ctgtgcgagcagggtcagcctgactccttactcctgtcgaccccccctccctcaccgagg
gacatggacagaagtgcagtggtgatcaaccagcctgccccgctctccctgccacaccag
gccacagccaacactctggcacacagctctgattcggaggaggaatctgatccagttcag
tgtggaaggaaaagctctgcagaggaaatggcacattttcttccagagtacgacactgtt
ctcagtgatctggacagtccgttatggtga
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