Nematolebias whitei (Rio pearlfish): 119417661
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Entry
119417661 CDS
T08042
Symbol
chl1a
Name
(RefSeq) cell adhesion molecule L1-like a
KO
K06758
L1 cell adhesion molecule like protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119417661 (chl1a)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
L1 family
119417661 (chl1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_6
C2-set_3
Fn3_Dep-1_3rd
Ig_RIMBP2
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
119417661
NCBI-ProteinID:
XP_037540849
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Position
11:34464056..34502315
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AA seq
1303 aa
AA seq
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MRFAWSLPLVLLWALSSKTAGVNIPLEVEQPPTITNHTSSPVIGLPFENTLTIRCEARGN
PRPEYRWTKDGQPFEFPKLSTIKTDNKNGTFMLHSKHFIQFQGKYRCFASNKLGTAMTGE
IEINVLDSPRFPKEIFDPVVVKEGEPITLHCNPPRGVPPRQIYWMTIGLQHIEQDERVSM
GTSGDLYFSYALPKDSHKEYCCFAAFSKIRTIVQKTAMVIKVERLRPDNYSSSDSGNTTE
HLPVKAPSLLLPSGVQTEKVLLKGENLQLECIPGGFPIPSITWMKLGESLTERVKLTNFN
RLLTISAVDQKDQGKYMCTAESSAGKVVHYFDVTVEEPPAWFTEPPQSQLTVIGSDVLMK
CSVSGNPPPVITWRRNGKIFREDPLNNRRVLDDTVVIHKAGPEDSGVYQCEASNRHGGIL
ANINVLVMNMAPLILTNNFQTYEVIVGGGVLMNCSVFSSPPSDISWTKEETAIEGERFHI
FENGQALNVIGTEKGDSGNYVCVARNTEGTSTLTAVLDVKDPTNIVNPPRDMQIISGTLA
QLTCQAEYDESLQDTFEVLWRKDEEEILLPSEENSRYVVKSGLLRIMNVNLSDQGVYKCI
AKTHLDEDAATAVLTVLDVPDAPTSLKISDIKEERNIVLSWVPGSDHNSSITEFVVEYEE
SHWEAGRWKELQKVAGNQATAELFLQGNLKYQFRVYAVNAIGPGPPSEPTERYPTSPAAP
DRNPENIKIQGHLPHQMDISWDPLLPTEYNGPGLEYNVSYRKLGVQDDWEVHLVQRPSFV
VKDTPTFIPYEIKVQSRNSFGSGPEPKIVTGYSGEDVPTAAPQNVAVEVINSTVVLVSWT
PVPPATVRGHLGGYNVYWQRIKSLLNPGKILNRSSSMSFPGDRSHVMVPGLEPFSEYKLT
VNVFNKKGKGPKSDPVTFGTPEGVPEPVPILTASNTQKNSVLLVWGPPLVTNGILSGYFL
LHHLLNETSLEVIDSRETNITGADITHWELRGLKEGSLYRFHLSACTQAGCGPPQAQESR
TVSVEDPTRSPAVAPVQNNPNCSLSAPSSITGNSSHFPLVPVLLNISSYVSDTFAKISWT
TGEEQEDFQLYVAYMNNRDGNWHFSEAVNTSQNVHIIDGLKPGTLYTIRLVAKKLLDNAS
IFEDVIQTRVTGVASRMDDDSTQRWFIGTMCAVALLTLVALMACFVRKNKGGKYAGTPPP
RLQDTLSMAKVKEKEDLYPDEESQGMNDDAFLEYSDNDEKPLKGTSLCSRDDPVGDSVSR
DSLVGYADGEEEFNEDGSFIGEYSGPKYRGSIGEPNGPSPISA
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgcgtggagtttaccactagttctgctttgggccctcagctccaagactgca
ggcgtcaatattcctttggaagtggagcagcctccaactataacaaatcatacatcaagt
cctgttattgggcttccttttgagaacactctcactatcagatgtgaagccaggggcaat
ccacggccagaatacagatggacaaaggatggccaaccctttgaatttccaaaactctca
acaatcaaaacagacaacaagaatggaacttttatgcttcacagcaagcatttcatccag
tttcagggaaaatacagatgctttgcttccaacaagttgggaacggccatgacgggggaa
attgagatcaatgttttggattctcccaggttcccaaaggagatatttgaccctgttgtt
gttaaagagggggaaccaatcaccctgcactgtaaccctccaagaggtgtgcccccccgt
cagatctactggatgactattggtctccagcacatcgagcaggatgagagggtctccatg
ggaaccagtggcgacctctacttctcctatgccttaccaaaggacagtcacaaggagtac
tgttgctttgctgccttttccaagatacgcacaattgtccagaaaaccgccatggttatt
aaggttgagcgattaagacctgataattactcctcctctgacagcggtaacacgactgaa
cacttaccagtgaaagctcccagcctgctgctaccctctggtgttcagacagagaaagtg
ttgctgaaaggagaaaatctgcagctggagtgcataccaggaggatttcccatcccaagt
ataacgtggatgaaactgggagaaagtctgactgaacgggtgaaactgaccaactttaac
aggctgttgaccatcagtgctgtggaccagaaggatcaggggaaatatatgtgcacggct
gaaagctccgctggaaaggttgttcattactttgatgtcacagtggaagagccacctgca
tggtttacagaacctccccagagccagctgaccgtgatcgggtctgatgttctcatgaag
tgctcggtcagtggaaatccaccaccagtcataacgtggaggaggaacgggaaaatattc
agagaggatccattgaacaacaggcgagtgctcgatgacaccgtcgtgattcataaagcc
gggccagaggacagcggcgtctatcagtgtgaggcctcaaaccgtcatggcggcatcctg
gccaacataaacgtcttggtcatgaacatggctcctctcattctgacaaacaacttccag
acgtatgaggtgatcgttggagggggcgtcctcatgaactgcagtgttttcagctctcca
ccatctgacatctcctggaccaaagaggagacggctattgaaggggagcgattccatatt
tttgagaatggacaagcattgaacgttatcggcacagaaaaaggtgacagtgggaattat
gtttgtgtggccagaaacacagagggcacgtcaactctcacagctgtgctggatgtgaaa
gaccccacaaatatagttaatccaccgcgagatatgcagatcatcagtgggactttggcc
cagttgacgtgtcaggcagagtatgatgaaagtctgcaggacacctttgaggtgctgtgg
aggaaggatgaggaggaaatcttactcccctctgaggaaaactccagatacgttgtgaaa
agtggcctgctgcgaatcatgaacgtgaacctgagcgatcagggggtgtataaatgtatc
gccaaaacacatctagacgaggacgccgccactgccgtactaacagtactagatgttcct
gatgctcccacaagtttaaagatatctgacatcaaggaggagaggaatattgttctgtct
tgggtacctgggagtgatcacaacagctctatcacagaatttgtggtggagtatgaggag
agccactgggaagctggcaggtggaaggagctgcagaaagttgctggtaaccaggcaact
gctgagctctttcttcagggaaatcttaaataccagttcagggtgtatgctgttaatgcc
attggacctggaccacccagcgagccaactgagagatacccaacatcccctgctgcacca
gacagaaacccagaaaatatcaaaattcaaggccaccttcctcatcaaatggacatcagc
tgggatccactcttgccgactgagtacaatggcccgggccttgaatacaatgtgagctac
agaaaactgggggtacaagatgactgggaggtccacctggtccagagaccctcctttgtc
gtgaaggacacccccacctttattccctacgagatcaaagtccagagcaggaacagcttc
ggctcaggtccagaacctaaaattgtcacaggttactctggagaagatgtacctactgca
gcaccgcagaacgtcgcggtcgaggtgatcaactccactgtggtgttagtcagctggacg
cctgttcctccagccacagtgcgaggtcatctagggggttataatgtttactggcagagg
atcaaaagtctcctgaaccccggcaagattttaaataggtccagctcgatgtcttttcct
ggagacaggagtcatgtgatggtgccggggctcgaacctttctcagagtacaaactcacc
gtcaatgttttcaataagaagggaaaagggcccaagagtgacccagtcaccttcggtact
ccagagggagttccagagccggtgcctatattgaccgcctccaacactcagaaaaactct
gtgctgctggtgtggggaccgccgctggtgacaaatggcatcctgtctggttatttcctg
ctgcatcacctcttaaatgagacgtcactggaggtgattgattcccgggagacgaacatc
actggggctgacatcacgcactgggagctcaggggtttaaaggagggcagtctctaccgc
ttccacctcagcgcctgcactcaagcaggttgtggacctccgcaggcccaggagagcaga
actgtgtctgtagaagatccgacccggtctccagctgtggcccctgttcagaacaatccc
aactgctccctatctgctcccagctctatcacgggcaattcttctcattttcctttagtt
ccagttctgttgaacataagctcttacgtgagtgacacctttgctaaaatcagctggact
accggagaggagcaggaggactttcagctttatgtggcttatatgaataaccgtgatggt
aactggcacttctcagaggcggtaaacacttcccaaaatgtccacattattgatgggctc
aaacctggaacactgtacaccatacggctcgtggccaagaaactgcttgataatgctagc
attttcgaggatgttatccagacacgagtcacaggtgtagccagtcggatggacgacgac
tcaactcagcgctggttcatcgggaccatgtgtgctgtggccttgctcacccttgttgcg
ctcatggcatgctttgtgcgaaaaaacaaaggtggcaaatatgcaggtacgccgccaccc
aggctacaagacacgctgtccatggcaaaagtgaaagagaaggaggatctgtatcctgac
gaggagtcacaaggaatgaatgatgatgccttcttagaatacagtgacaacgatgagaag
ccactgaagggaactagcttgtgttccagagatgatcctgtaggagacagcgtcagcaga
gacagcttggtcggctatgcagatggagaggaagagttcaatgaggatggctcgttcatc
ggcgaatactctggacccaagtacaggggctctatcggcgagcccaatggacccagtccc
atctctgcctaa
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