Nematolebias whitei (Rio pearlfish): 119417663
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Entry
119417663 CDS
T08042
Symbol
cntn3a.1
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119417663 (cntn3a.1)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
Contactins
119417663 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
Ig_6
C2-set_2
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
119417663
NCBI-ProteinID:
XP_037540850
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All DBs
Position
11:34584600..34659201
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AA seq
1028 aa
AA seq
DB search
MELLWKLIMLLSLVECLSGSGVLLKPVFTKQPGSVVFPIQAGEIQREVVFSCEAQGHPSP
FYRWKLNDSFILPSPGSRHSLMGGNLHISRLNKDEDVGIYQCLASNSFGTIVSREASLHV
AYLDNFKTQRRSPVRVREGQGVVLLCGPPPHSGELTFMWIFNEYPSFVIQDTRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVP
VAKSSTVKLECFALGNPVPTISWRRVDGASFSRKVDINKASGVLEIPYFQLEDAGVYECV
AENSRGRNSVQGKLSFYAPPQLIEKPQDVQKTIDDTLVWECKANAKPKPSYHWLKNGDPL
DLMEDRVQVNNGVLTISSLNLADIGMYQCVAENKHGRIFTNAELRVIAIAPDFSQNLLKA
QTLARQSGDVLIECKPRMSPRGIISWRKGKEALRESHRIMVLDSGSLRISNVTKIDAGLY
TCVARNQFGVASSSGSLLVKEATVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWFF
NEQLIHFGSHGSFFEKVGGRSAGDIMIRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRGP
PGPPLDCQVTEITETTASLSWRPGLDNHSPILSYTIQARTPFSLGWQAVTTVPEFLRGKH
LSASVVDLSPWVEYEFRVLATNGIGTGEPSKPSKKARTKEMLPRVTPARVNGGGGGRSEL
VITWEPVPEELQSGPGFGYVVAFRPLGTQGWMQAAVTSPEASRYVFKNESIPPFSPYQVK
VGVYNNKGEGPFSPVTTIYSAEEEPSRPPGRLRARSVSASEVEVTWKPLVWSNSRRHILG
YELQYWGEKVKQDAASVIRTVGNKTTVLIRDLEGSSTYCMSLRAYNSAGVGPQSSVVNVT
TKKPPPSQAPDKIRWNTSDSKVILRWDQVHALENESEVTGYKVMYSQDKHSRPSVVETNN
TSLELSLPVNQDYVIQIKPFSEGGEGSSSPQITIPKIEGSVAVGAAPELLPFQLVIFAAQ
LLTTRMVL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggaattgctgtggaaacttataatgctgctgtcgttggtggagtgtctgtcaggaagt
ggagtcctgctaaagcctgtcttcaccaaacaaccaggcagtgtggtttttcctattcaa
gcaggagagatacagagggaggtggtctttagctgtgaggcccaaggacatccatctccc
ttctacaggtggaaacttaatgactccttcatcctgcccagtccggggtcacggcactct
ctcatgggtggaaacttacacatcagccgtttgaacaaagatgaagatgttggcatctat
cagtgtctggcatcaaactcttttggcacgattgtcagcagagaggccagtctccacgtt
gcatacctggataatttcaagacacaaagaagaagtccagtgagggttcgtgaaggtcaa
ggagtggtcctactgtgtggtccacctcctcactctggagaacttactttcatgtggatc
ttcaatgaatacccgtcgtttgtcatccaggacacgcgtcgatttgtgtcccagaaaaca
ggtaacctctacatcgcaaaggtggaaccctctgatgtgggaaactacacgtgtgtagtc
accaacactgtcaccaaaagcagcgttcaaggaccgccgacgcctttagtcctgcgggtt
gatggtgttatgggcgaatatgagccaaagatcgaagtgcagtttcctgaagttgttcct
gttgctaagagctcaacagtcaaactggaatgttttgcacttggaaacccagtgccaacc
atcagctggaggagagtggatggggcctcatttagcaggaaggtggacataaataaagcc
agtggtgttttagagatcccatatttccagctggaggatgcaggagtgtacgaatgtgtt
gctgaaaacagcagaggaagaaactcagttcaaggaaaactgtctttctatgctccacca
cagctgattgagaaacctcaggatgttcagaagaccattgatgacactctagtgtgggaa
tgcaaagccaatgcaaagcccaaaccctcataccactggctgaaaaatggagaccctctg
gatctcatggaggacagagttcaggtaaataatggagtgctgacaatcagcagcctaaat
ctggcagacattggaatgtaccagtgtgtggcggagaacaagcatggtcgaatcttcacc
aacgccgagctccgtgtcattgccattgccccagacttctcccagaatctgctaaaggct
caaaccttagcacgacaaagtggcgatgttctgatcgaatgtaagcccagaatgtctcct
cgtggcattatttcttggaggaaaggaaaagaagctctgcgagaaagtcacagaattatg
gtgttggatagtggaagccttcggatatctaacgttacgaaaatagatgcaggactctat
acgtgtgtagccagaaaccagtttggagtggcaagcagttctggcagccttttggttaaa
gaggcaacagtgatcacgagtccagcaggccacctggatgtgactgtgggtgagagcatt
gtgctgccctgtcaggtttcacacgatccaacacttgacctgaagttcacctggttcttc
aacgagcagctcatccacttcggaagccacggctccttctttgaaaaagttggtgggcga
tcagctggggacattatgatacgaaacattcaactgaggcatgctgggaaatacacctgc
gctgttcagaccaaggtggacagtgtgtccatcgccacagatgtagttgtcagaggtcct
ccaggtccacctttggactgtcaggtgactgagatcacagagaccacagcctctttatcc
tggagacctgggttggacaaccatagccccatcctcagctacaccatccaggccagaaca
cccttttctctcggatggcaagctgttaccactgttcctgaatttctaagggggaaacat
ctctctgcttctgttgttgacctgagcccctgggtggagtatgagttcagagttctggca
accaacggtataggaacaggagagcccagcaaaccctctaagaaggcccgcaccaaggaa
atgcttcccagggtgactccagcgagagtgaatggtggtggtgggggacgttcagagctc
gtcatcacgtgggaacctgtccctgaggagctacagagtggtccgggctttggatatgtg
gttgctttccgcccactcgggacacagggctggatgcaagctgctgtcacatccccggaa
gcttctagatacgtgttcaagaatgaaagtattccacccttctccccttaccaagtcaaa
gtcggggtatacaacaacaagggtgaaggacctttcagtccagtgactaccatctattca
gcagaagaagagcccagtagacctccggggaggctgagggcgaggagcgtatcagcatcc
gaggtggaggtcacctggaagccgctggtttggagcaacagccgcagacatatcctgggc
tatgagctgcagtactggggggagaaagtaaagcaggatgcagccagtgtgatcagaaca
gtggggaataaaacaacagtactcatcagggatctggagggcagcagtacctactgcatg
tccctaagggcctataacagtgctggagtgggtccacagagcagcgtagtcaatgtcaca
accaagaagccaccacccagccaagccccagataaaataaggtggaacacttctgactcc
aaggtcattctgcggtgggaccaggtgcacgccctggagaacgagtcagaagtcacggga
tacaaggtgatgtacagccaggacaaacacagccggcctagtgtggtggagaccaacaac
acctccttggagttgtcgctgccagtcaaccaagactacgtgatccagattaaacccttc
agtgagggaggggaaggcagcagcagcccccagattacaatccccaagattgaaggctcc
gtagccgtgggagcagccccggagctgttgccatttcaacttgtcatctttgcagcgcaa
ctcctcacaaccagaatggtgctatga
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