Nematolebias whitei (Rio pearlfish): 119417677
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Entry
119417677 CDS
T08042
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119417677 (ybx1)
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119417677 (ybx1)
03041 Spliceosome [BR:
nwh03041
]
119417677 (ybx1)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
119417677 (ybx1)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119417677 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
119417677 (ybx1)
Spliceosome [BR:
nwh03041
]
Common components
Common spliceosomal components
General mRNP proteins
119417677 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
119417677
NCBI-ProteinID:
XP_037540863
LinkDB
All DBs
Position
11:complement(36584851..36589361)
Genome browser
AA seq
325 aa
AA seq
DB search
MSSEAETQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA
DRNRYRRYPRRRGPPRGGDYQENYQSDEGEPSSGGRDKSSREGGENAPEGDTQQQQRRPT
YPGRRRYPPYFVGRRFGRRPPYTNNAPRGEMTEGGEGDESQGGPDQGNKPVRQNYYRGFR
PRFRPRGPPRPRPVQDGEEDKENQGGDGGQNQQPRQRRYRRNYNYRRRRTQSDSKTGQEN
KEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacgcaacaacctccacagcctgctgcggatgcggagagccca
tccagcccggcagccgcagcttccgcgggggataagaaggtcatcgcaacaaaagttctg
ggtacagtgaaatggttcaacgtcaggaatggatatggttttatcaacaggaatgacacc
aaggaggacgtttttgtacaccagacggccataaaaaagaacaatccgaggaaatatctt
cgcagtgtaggagatggcgaaactgtggagtttgatgtagttgaaggagagaagggagca
gaggcagcaaatgtcactggccccggaggcgttgcagtccagggaagtaagtacgctgct
gacaggaatcgttacaggcgctacccacgaaggaggggccctccccgtgggggagactac
caagagaactaccagagtgacgagggtgagcctagcagcggaggacgtgacaagagcagc
agagaggggggagagaacgcccctgaaggagacacgcagcaacagcagcgcagaccgact
taccctggcagacggcgctacccgccatactttgtaggtagacgcttcggccgccggccc
ccgtacaccaacaacgcaccacgcggagaaatgactgagggaggtgaaggtgacgagagc
caaggtgggccagaccagggtaacaaaccagtgaggcagaactactacagaggcttccga
ccaaggttcagaccaaggggtccaccccgtcccagaccagtgcaagatggcgaggaggac
aaagagaatcagggtggtgacggtggtcaaaaccaacagccccgccagcggcgttaccgc
cgcaactacaactaccgccgcagacgcacacagtccgatagcaaaacaggccaggagaac
aaagaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccag
cagggtggggctgagtag
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integrated database retrieval system
