Nematolebias whitei (Rio pearlfish): 119417682
Help
Entry
119417682 CDS
T08042
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119417682 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119417682 (spast)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
119417682 (spast)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119417682 (spast)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119417682 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
AAA_14
AAA_16
Mg_chelatase
IstB_IS21
AAA_24
NPHP3_N
DUF815
nSTAND3
AAA_2
MIT
AAA_33
Motif
Other DBs
NCBI-GeneID:
119417682
NCBI-ProteinID:
XP_037540876
LinkDB
All DBs
Position
1:complement(49563004..49567761)
Genome browser
AA seq
476 aa
AA seq
DB search
MSTKINATRSKDSGEVIKNYHKQAFEYISKALRIDEDDTVDKGEAVQWYKRGISELERGI
AVDITGTGDQYDRAKRLQDKMVANLTMAKERLALLEATLESKSRSHPQPTSSCVLPQSKP
KSHPSVSASSTTCRPSTVVRPPTRPSDPKVTPRMGRVQNGKATAGKQPPKRDMRNFKNVD
SKLASLILNEIVDRGTSVSFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLF
GPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSVIFID
EVDSLLCERREGEHDASRRLKTEFLVEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFA
KRIYVALPDEKTRLTLMKNLLGKHGNPLSPNELSYLSKATAGFSGSDLTSLAKDAALGPI
RELGPDQVRNISAKEMRNIKMKDFEDSLKRIKPTVSPATLSMYTKWNKEFGDTTAF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaaaattaacgcaacaagaagcaaagacagcggagaagttattaaaaactac
cacaagcaagcgtttgagtacatatccaaagcgttaaggatcgacgaagatgatacagta
gataaaggggaagctgtgcagtggtacaagagagggatctctgagctggaaagaggcatt
gctgtggacatcacaggaacaggagatcaatatgatcgggcgaagagactgcaagataaa
atggtcgccaacctcaccatggccaaagaaagacttgcgttgttggaggccacattggaa
tctaaaagtagaagtcatccacagcccacatccagctgtgttcttccacagtcaaagcct
aaaagccatccatcggtttcagcctcatccaccacctgcaggccctccaccgttgtcaga
cccccaacgagaccctccgacccaaaggtgacaccgcgcatgggaagagttcagaacggg
aaagctacagctgggaagcagccgccaaagagagacatgagaaacttcaagaatgtagac
agtaaactggccagcttgatcctgaatgaaattgttgacagggggacgtctgtgtctttc
gatgacattgcaggacaagatctggccaaacaagcacttcaagaaattgtcatccttcct
tccttgagaccagagctgttcactggcctgagagcacctgctcgtggtttactgttattt
ggaccccctggaaatgggaaaactatgctggcaaaagctgtggctgcagagtctaatgct
acattcttcaatataagtgctgctagtttgacatcaaaatatgtaggagaaggtgagaag
cttgtacgagcgctgttttcagttgcgagagaattacaaccttctgtcatcttcatcgat
gaagtggacagcttgctctgtgagcggagggagggggaacacgacgcctctcgacgctta
aaaaccgagttcctcgtagagttcgacggggtgcagtcgggaggggacgagagggttctg
gtgatgggagcaaccaacaggccgcaggagctcgatgaagcagttttacggcgctttgct
aaaagaatttacgtggcactgccggacgagaagaccagattgactctgatgaaaaacctt
ttgggaaaacacgggaatcctttgagcccgaatgaactgtcctacctttcgaaagcgaca
gcagggttttcaggaagcgatctcacgtcgttagccaaagatgctgctctcggacccatc
agagagctgggaccggatcaggttcggaacatatctgcgaaagagatgcgcaacatcaag
atgaaagacttcgaggactccctgaagcgcatcaaaccaaccgtcagtccggccacgctg
agcatgtacaccaagtggaacaaagaatttggagacacgacagctttttga
DBGET
integrated database retrieval system
