Nematolebias whitei (Rio pearlfish): 119417687
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Entry
119417687 CDS
T08042
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119417687 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119417687 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119417687 (srsf6a)
Spliceosome [BR:
nwh03041
]
Common components
Common spliceosomal components
SR proteins
119417687 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119417687
NCBI-ProteinID:
XP_037540880
LinkDB
All DBs
Position
11:37069847..37074460
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AA seq
406 aa
AA seq
DB search
MPRVYIGRLSYQIREKDIHRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDSYGGGGGGGGGGDRYGGGGGGGGGGGGSYWGGGGRSSSSYSN
RNRTNRDKYGPPVRTEYRLIVENLSTRCSWQDLKDFMRQAGEVTYADAHKERNNEGVIEF
RSYSDLKRAVDKLDGTDINGRKIRLVEEKSRKRRSYSGGSRSRSRSRRRSRSRSRSHSRS
RSRSHSRSRSRSDKRKRQSRSRSERKSRSKSGDRKSGSRTNKSRSRSQKSKSRSRSQKSK
SRSQSRKSRSRSAERKSKSRSKSRSRAKSDRDSRSRSKEMSGDKKSRSRSTSPVENGKEE
RAAKSASRSPSPQEGDRRSKSREKRSASRSVSRSRSRSRSRSASQD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagtttacattggacgtctgagctatcaaattcgcgaaaaagatatccatcga
tttttcagcggatatggaaaactcatggagattgacttgaaaaacggctatggattcgtg
gagtttgaagataatcgggatgccgacgacgcagtttacgagctgaacgggaaggagctg
tgtggagaacgcgtgatcgtcgagcatgctcgaggcccgcggcgagatcgggattcctac
ggcggcggcggcggcggtggtggtggcggcgaccgctatggtggaggcggaggcggaggt
ggaggtggtggtgggagttactggggcggcggtgggcgcagtagcagcagttacagcaac
aggaaccgcacaaaccgggataagtatggaccaccggttcgtactgagtatcgtctcatt
gtggagaacttgtccacccgctgtagttggcaagacctcaaggacttcatgcgtcaggcg
ggtgaggtaacttatgccgacgcccacaaggaacgtaacaatgagggggtaattgagttc
aggagctattctgatttgaagagggctgtggacaagctggacggtacagacatcaatggg
cgcaagattcgtttggtggaggaaaaatctcgcaaacgaaggtcctattctggcggcagc
cgctccagatcccgtagtcgccgccgctcccgcagcagaagccgcagtcactcaaggagt
cgctccaggtcccactcccgatctcgttcccgcagcgacaagaggaaacgacagtcccgc
tccaggtctgaaaggaaatctcgctccaagtctggcgataggaaatcggggtctcgcacc
aacaaatcccgttcacgatcccagaagtccaaatcccgttcacgatcccagaagtccaaa
tcccgttcgcagtctcgcaagtcccgttcccgttcagctgagagaaagtcaaagtcccgt
tcaaagagtcgttctagagcaaagtctgaccgggattctcgtagccgctcaaaggagatg
tctggggacaagaagtcccgaagccgttccacttcacctgtcgagaatgggaaagaggag
cgtgcggctaaatctgcctcccgctctccatcgccacaagaaggcgatcgccggtctaaa
tcaagagagaagcgttcagcgtctcgctcagtgtcccgctcgaggtctcgctcgcggtcc
agatccgcctctcaggattag
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