Nematolebias whitei (Rio pearlfish): 119417696
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Entry
119417696 CDS
T08042
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00531
Glycosaminoglycan degradation
nwh01100
Metabolic pathways
nwh04142
Lysosome
Module
nwh_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
119417696 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119417696 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
nwh02042
]
119417696 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119417696 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
119417696 (si:dkey-72l14.3)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
119417696 (si:dkey-72l14.3)
Bacterial toxins [BR:
nwh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
119417696 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Enzymes
119417696 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
Enzymes
119417696 (si:dkey-72l14.3)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
119417696
NCBI-ProteinID:
XP_037540889
LinkDB
All DBs
Position
11:38141101..38161335
Genome browser
AA seq
532 aa
AA seq
DB search
MEWAELPFCPDPQPQPKLRRSRRLICSSSSSVLLYLIGAFAGLCNAGPSQPARPPLLSGQ
PFIIFWGIRDSSCADRINPTSFSMEREGRVAVFYENTLGNYPYFVDKNTPVNRGLPQHTR
LDSHVQKTQQDLEAALPAPRYLGLGVLRWAEWVPQWSRNQEKQAMYQEASRKLMKTFFPN
WTPEEVEKWSRVDFEAAAQSVMVETLREVKRLRPKALWGFSSYPSCCNGDPTQTPLTNYS
GQCPPAEMALNDELMWLWKRSSALYPLLTLEKLQAGTLGVRIYLSGQIKEALRVGSLAGA
EFGLPVFPLVKSVYASTRTFLSQGDLVNTIGESAAMGTAGVVILDRSETKTERECQGLAE
FVRKVLGPYSVNVTKATQLCSTSLCQGKGRCVRQNPDSSAYLHLPPQSTAVQKVKATAQP
DTVSKTAEPDPAEIWKKDFQCQWYKTDDGEVSDQQSPKDGAPYGGKAKGNTEGMVETTIK
SATENTLTGSDLPATGSATALLNLPANGGTNPVNAPSLYILLLGAVSSRLGP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctgaactgccgttctgtccagatccacaacctcaaccaaaactgagacgc
agccgtcggctgatctgctcatcatcatcatcagtcctcctctacttgattggtgccttt
gctgggctttgtaatgctggcccatctcaacctgcccgtccacctctcctatctggacaa
ccttttattatcttctggggcatcagagactcttcctgcgctgacagaataaatcccacc
tctttcagtatggaacgtgaggggagagtagctgtgttttatgaaaatacattgggtaac
tatccgtactttgtagacaaaaacacaccagttaatagagggcttccacagcacacacgc
ttggacagccatgtccagaagacacagcaagacttggaagcagctttaccagcccctagg
tatcttggactgggggtgctgcgctgggcagagtgggtaccccagtggtccaggaaccaa
gagaaacaagcaatgtaccaggaggcatcaaggaaactgatgaagacttttttcccaaac
tggactccagaagaagtggagaagtggtcacgggtggactttgaggctgcagcccagtca
gtcatggtggagactctacgggaggtcaaaaggttgaggcccaaagcattgtgggggttt
tcctcttaccccagctgttgcaacggtgatcccactcaaacgccattaaccaattacagt
ggccagtgccctcctgcagagatggcccttaatgatgagcttatgtggctatggaaacga
agctcggctctctaccccctcctgaccctggaaaagttacaggctgggactcttggagtg
aggatctatttatcaggtcaaataaaagaagcactaagagtaggatctctggctggagca
gagtttggtctgccagtatttcctttagtaaagagtgtgtatgcctcaacaaggacgttc
ttatcacagggtgacctggtcaacacgataggagaaagtgctgccatgggaacagcaggc
gttgtgatcttggacagaagtgagacaaagacagagagagaatgccaaggcctggcagag
tttgtccgtaaagtcctgggaccttactccgtcaacgttaccaaggcaactcagctctgc
tcaacctctctttgccagggaaagggtcgatgtgttcgtcaaaatccagacagctctgct
tatctccatctcccaccccaatctacggcagtacagaaggtcaaggccacagctcagcca
gacacagtcagtaaaacagcagaaccagacccagctgagatctggaaaaaagacttccaa
tgtcagtggtacaagacagatgatggggaagtctctgatcagcaatcgcccaaagatgga
gctccgtatggaggaaaagcaaagggaaacactgaaggcatggtggagactacaataaaa
agtgccactgagaatacccttactggaagtgatttacctgctactggaagtgcaactgct
ttactgaacttacctgcaaacggtggtaccaatccagtgaatgccccgagcctttacatt
ctgctgctgggggctgtaagctcaagactgggaccttaa
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