Nematolebias whitei (Rio pearlfish): 119417708
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Entry
119417708 CDS
T08042
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119417708 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119417708 (xpc)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119417708 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
119417708
NCBI-ProteinID:
XP_037540904
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Position
11:complement(38056279..38066016)
Genome browser
AA seq
930 aa
AA seq
DB search
MAKRRKCAETDEEEATTKKLKRAMTEVTRRAKTRVKKKDTVNDLTDKEEKFEKKVNTKPR
LSSKRAAEKNSSSTNTSTDVKTSKYFQSPLKQEVDSEDDFDMDTSAPPLVDVSPKKMEKE
EEEEDDSEDEDDWEEVEELAEPLGPVETPEPVLPSQPVEIEIETAEVRKQKKRQAEVETY
FRRMMKRFKKDLLIDTHKVHLMCLIANGMFRNRLCSQPDLLAITLSLLPSHFCMVAKERI
DQNYLSGLLKWFRATFTLNPSLSCEEGLVPRALLERRLASLSARDHQEMTHIFLLILRSL
QLFCRLVLSLQPVPFKPPSAKPKGARKLTAATESCQKNNCVKPKVSPGSKRPSGGRKTKG
SSGGKQSKRNETNEEKEEALIFSGGQRPKNSKRRSVASKISYREESNSDGDDGNEEEELS
DAEEFQATSEDDSKDSESEAKSAKRKKGKAKRTAEARINKNTTAPKRKSGGKKQEKAEEE
SELEEDQGADKNERAASNKTKPQSGKSKERPGTDEWLEVYLDKTSSWVCVDVQHGVGLPH
LCSQNATAPLTYVVAVDGSGFLKDLGRKYDPTWMTSSRKRRVDDEWWEETLEPFLGPEDE
RDKKEEKELQNKLQNKPLPVSVAEYKNHPLYALKRHLLKYEALYPPTATVLGYCRGEPVY
SRDCVHTLHSRETWLKEARTVRLGEEPFKMVKGFSNRSRKARMMSETKNEKDLPLFGEWQ
TEEYQPPIAVDGKVPRNEYGNVYLFKSCMIPVGCVHVRLPNLHRVARKLDLDAAPAVTGF
DYHGGYSHAVTDGYIVCEEDEEILRAAWVEEQEIQKQKEKEKKEKRAVANWTLLVKGLLI
RERLKQRYNKKTQGFGSLAHEGDAGGFSSDEEVVEGDTSGAKTASETLAMSWPQNRQAEE
DAGCTSKSKKKTTRREKKSQEQHLFPFEKV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagaaagtgtgcagagacagacgaagaagaagccacaacaaagaaactg
aagcgggcgatgactgaagtaaccagaagagcaaagacaagagtgaagaagaaagataca
gttaatgatcttacagataaagaggagaagtttgagaagaaggtcaatactaagccacgt
ttgtcctcaaaacgagcagcagagaaaaattcttccagtaccaacaccagcactgatgtc
aaaaccagtaaatacttccagtccccactaaagcaggaagttgatagtgaagatgacttc
gacatggatacctctgcaccacctctggttgatgtgagccccaagaaaatggagaaagaa
gaagaagaggaggatgatagtgaggatgaagatgattgggaagaagtggaagaattagct
gaacctctgggtccagtcgaaacgcctgagccggtcctgccttctcagcccgtagagatc
gagatcgagacggccgaagtcagaaagcagaagaagaggcaggcagaggtggagacttac
ttccggcgaatgatgaagagatttaagaaggacctgctgattgacacacacaaggtccac
ctcatgtgccttatagccaacgggatgtttcgcaaccgtctttgcagccaaccggaccta
ctggccatcactctgtccttgctgccgtcccacttctgcatggtcgccaaggaacgcatt
gatcaaaactacctctctggactgctcaaatggtttagagcaaccttcacgctcaaccct
agtctttcctgtgaggagggtctggtccctcgggctctgctggagagacgactggcctca
ctctcagccagagaccaccaagagatgactcatatttttcttttgattctaaggtctctg
cagcttttctgccgattggttctctcattacagccagttcctttcaaacctccttcagcc
aagcccaaaggggccagaaaattaactgctgccactgaatcatgccaaaaaaacaactgt
gtgaagcccaaagtctctccaggctcaaagagaccatcaggaggaaggaaaacaaaaggg
agcagtggaggcaaacaatcaaagaggaacgaaacaaacgaggagaaagaggaagctctt
atattttcaggaggacagagacccaaaaattctaaacgtcgcagtgtggcgtcaaagatc
agctacagagaggagagcaacagtgatggggatgatggcaatgaagaggaggagcttagt
gatgcagaagagtttcaggcaaccagtgaggacgacagcaaggactcagaaagtgaagcc
aagtctgcaaaaaggaagaaagggaaagcaaaaagaacagctgaagcaagaatcaacaaa
aatacaacagctccaaaacgaaaaagtggtgggaaaaaacaggaaaaagctgaggaagag
agtgagttggaggaagatcaaggagctgataaaaatgaaagagcagcaagtaacaagaca
aaaccacagagtgggaaaagcaaagagcggcctggaacagacgagtggttagaggtgtac
ctagacaaaacatcttcttgggtttgtgtagatgtgcagcacggagtaggcctgcctcat
ctctgctcccagaatgcaacagcaccactgacctatgtggtggcggtggacggaagcggg
tttttaaaggacctgggaagaaagtatgaccccacctggatgacatcatccaggaagagg
cgggtggacgatgaatggtgggaggaaacactcgagccattcttgggcccggaggatgag
agagacaaaaaggaggagaaggagctccagaataagcttcagaacaagcccctgccagtc
tctgtagctgagtataagaaccatcctctgtatgccttaaagagacacctgctgaagtac
gaagccctttatcctcctacagccaccgtcctcggatactgcagaggagagcctgtgtac
tccagagattgtgtgcacaccctccactccagagaaacgtggctaaaagaagcacgaact
gtccgactcggagaggagccattcaagatggtgaagggcttctccaatcgttctagaaag
gccaggatgatgtccgagacgaagaacgagaaggaccttcctctgtttggagaatggcag
actgaggagtaccaaccacccatagccgtggatgggaaggttcctcgtaacgaatacggt
aacgtctacctctttaaatcctgcatgatcccggtgggctgtgttcatgtcaggctgccc
aacctgcaccgtgtggcccgaaagctggacctcgatgctgcacctgcggtcacgggcttc
gactaccatggaggatattcacatgctgtaactgatggttacattgtgtgtgaagaagat
gaggagattctcagagccgcctgggtggaagagcaggaaattcagaaacagaaagaaaaa
gagaaaaaggaaaagcgagctgtcgccaactggactctgctggtgaagggactcctgatc
agagagaggcttaaacagcgttacaacaagaagacccaggggtttgggagccttgctcat
gaaggcgatgctgggggtttttcttctgatgaggaggtggttgaaggggacacttctggg
gctaagaccgcatctgagactctggctatgtcctggccccaaaacagacaagctgaagag
gatgccgggtgcaccagcaaatccaagaagaagacgacaagacgagagaagaagagtcaa
gagcagcatttattcccctttgagaaagtttaa
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