Nematolebias whitei (Rio pearlfish): 119417808
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Entry
119417808 CDS
T08042
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119417808 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119417808 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119417808 (snx5)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Macropinocytosis
Sorting nexins
119417808 (snx5)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119417808 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF4355
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
119417808
NCBI-ProteinID:
XP_037541014
LinkDB
All DBs
Position
1:51045129..51053044
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AA seq
398 aa
AA seq
DB search
MSSLDEYSNDKLRSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPEFSVP
RQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMKQ
ELEAEYLAVFKKTVQVHEVFLQRLSSHPVLSKDRNFQIFLEYDQDLSVRRKNAKEMFGGF
FKNMVKSADEVLISGIKEVDDFFEQEKTFLLDYYSKIKDSTTKAEKMTRSHKNIADDYIH
ISATLNSICAEDSTANKKNLEKLSELFEKLRKVEGRVASDQELKLTELLRYYMRDIQAAK
DLLYRRARALADYESSNKALDKARLKSKDIPQAEEHQRQCLQKFDKLSESAKKELTSFKG
RRVMAFRKNLVEMAELEIKHSKNSVVILQGCIDLLKSN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccctagacgaatatagtaacgacaagctgcgctctgtgtctgtggacttgaac
aacgatgcgtctcttctcattgacattcctgatgcgctctgtgaaagggacaaggtcaag
ttcacagtccatacaaagacaactcttagctccttccagaagccggagttctctgttccc
aggcagcatgaagacttcatctggctgcatgacactctggttgaaactgaggactatgca
ggtttaataatccctccagcacccccaaagcctgattttgaaagcccaagagagaagatg
cacaaactgggtgaaggtgaagccactatgacgaaagaggagtacactaaaatgaagcag
gagctggaggctgaatacctggctgtgttcaagaaaactgtccaagtgcatgaagtcttc
ttgcagagattgtcctcccaccctgttttaagcaaagacagaaacttccagattttctta
gagtatgaccaggatctcagtgtgcggagaaagaatgcaaaggaaatgtttgggggattc
tttaaaaacatggtgaagtcagctgacgaggttctcatctcaggaataaaggaagttgat
gacttttttgagcaggagaagacatttttgctcgactactacagcaagataaaagattcc
actaccaaagcagagaagatgacccgttcacacaaaaatattgcagacgactacattcac
atttctgccacgttaaacagcatttgtgctgaagacagtacagccaataagaaaaacctg
gagaagttgtcagaactgtttgagaagctcagaaaagtggaagggagagttgcatctgac
caggagctgaaactcacagagctgctgagatactacatgagggacatccaggctgctaag
gaccttctttaccggagagcccgggcgttagctgactatgagagctctaacaaggccttg
gataaagctcgactgaagagcaaagacatcccccaggcagaggaacaccagcggcagtgc
ctgcagaaattcgacaagctctctgaatctgcaaaaaaagaactcaccagtttcaagggc
agacgagttatggccttcaggaagaacctcgtagaaatggctgagctcgagataaaacat
tccaagaacagcgtggttatattgcaaggctgcatcgacctgctcaagagcaactga
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