Nematolebias whitei (Rio pearlfish): 119417859 Help Entry 119417859         CDS       T08042                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nwh00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     119417859 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nwh03400]     119417859 (msh6) DNA repair and recombination proteins [BR:nwh03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      119417859 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  119417859 NCBI-ProteinID:  XP_037541045 LinkDB All DBs Position 1:52256700..52266802 Genome browser AA seq 1384 aa AA seqDB search MAKQSSIFKFFTKSPPPVSKPKPSPSPAEADLPSSVHRSNSSPKEEARQTQQQESAKTSK VKPKSNPKAASSKGFKKLFGDIKAQTTEDSNSTCFSAGVLVWAKLEGHPWWPCMVVPQPL TGQQMRRSGRDQRVHVHFFDEPPTRGWVSTKYIREYQGSDSSDVKPGGVFFSGKPVIRHA MELADGLIFDSPEKRLKIPLCMDPSDEEEEADDEEMELDKSSVMDEEISDVDEKKNEEVK PSKVSRQCARASKDKASKAKRRRIVVASDSDESDEEFKPEQAASSSEDEDEEGAVNSGDE AKASSQESEADSPVKPLKRKRPAAKSVNAKAKKPAVQSATPVRAAAAVAADTKSRLLAFS APDDFESQTEGSGTAGGATIWDHEKLEWLQDGKRKDRKRRRQTDDDYDPSTLYVPEDFLN RVTPGMRRWWQMKSEMLDTVIFYKVGKFYELYHMDAVVGVNELALTFMKGTWAHSGFPEI GFARFSNVLVMKGYKVARVEQTETPEMMEARCKTMAKPTKFDRVVKREVCRIITRGTQTY SVLDGAPSESQSKFLLSLKEKAEDESSGRYRTYGVCFVDTSVGRFHIGQFSDDRHCSRLR TLISHFSPAEVLFEKGNPSVETRKILKASLSSALQEGLNAGTQFWDAQKTLKSLSEENYF QEVSGEEQGAGNSLLPALLKKMASESDSLCLTPKEGCELALSAFGGCIFYLKKCLIDKEL LSMANFEEYVPVDVEMEKAAGPTSFFAQTRQRMVLDGVTLANLEIFQNGSGGTDGTLLER LDTCSTPFGKRLLKQWLCAPLCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDLERL LSKIHSIGTPLKGQDHPDSRAVLYEDVTYSKRKITDFLSALEGFKTMQEIISVVAPVSEE FRSTLLLQVVSLKTEKNGLFPDLSAELKRWETAFDHQKARSTGVITPKAGFDPEYDQALA GIKSCERELQDYLERQKKRLGCKSMAFWGTGRNRFQMEVPDSVSERNIPEEYDVKSTKKG CKRYVTKESERLFSELQRFEEKRDAALKDCMRRLFYNFDKNYRDWKTGVECMAVLDVLVA LSRYSQGGDGAMARPQVVLPEDDSQVVPFINLTGSRHPCVTKTFFGDDFIPNDVFIGCPG GSGSEEVEGCASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLRFTPVDRVFTR LGASDRIMAGESTFYVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKELA EKICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENECEDPSQETITFLYKFITGACPK SYGFNAARLANLPEEVIQSGHRKAKEFERSTISLRLFKKLCQFAEDSTLDSTRFTSLVQL LNTL NT seq 4155 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcagagctccattttcaagttcttcaccaagtctccgccgcctgtgtccaag ccgaagccgagcccctctccggccgaggcggacctgccctcctcggtgcacaggtccaac tcgtctcccaaggaggaagctaggcagacacagcaacaggagtcagccaaaaccagcaag gttaaaccgaaaagtaaccccaaggctgcgagcagcaagggcttcaagaaactttttggc gacattaaggcccagacgactgaagacagcaactccacatgttttagtgctggtgtcctt gtctgggcaaaactggaaggacatccctggtggccttgcatggttgtcccccagcctctg accggtcagcagatgaggcggagtggtcgggatcaacgcgttcatgtgcatttttttgat gaacctcctacaagaggatgggttagcaccaaatatatcagagagtatcaaggctctgac agtagtgatgttaaacctggcggggtgttctttagtggcaaacctgtaattcgccatgcg atggagcttgctgatggacttatttttgacagtcctgaaaaaaggttgaaaataccgctt tgcatggatccatctgatgaggaagaagaagctgatgatgaagaaatggagcttgacaaa tcgtccgtgatggatgaagaaatcagtgatgtagatgaaaagaaaaatgaggaagtgaaa ccatctaaagtaagtcgacaatgtgcccgcgcttcaaaggataaggcgagcaaagccaag cggcggcgcattgtagtggcctctgacagcgacgaatcggatgaggagttcaaaccagag caagctgcatcgagcagtgaggatgaggacgaagagggggcggtgaacagtggcgatgag gcgaaagcgagcagccaagagtcagaagctgatagcccagtcaagcccctgaagcggaaa cgtcctgcagcaaagtctgtgaacgcaaaagcaaagaaacccgctgtccagtctgctaca cctgtacgagctgcagcagcagtcgcagccgacacaaagtcccgtttgttagctttctct gctcctgacgacttcgagagccagacagagggatcagggaccgccggaggtgcaacgatt tgggatcacgagaagctggagtggttgcaggatggcaagaggaaagacagaaaacggcgc agacagacggatgacgactacgatccctccaccttgtacgtccctgaagactttctgaac agagtcactcctggtatgcgtcggtggtggcaaatgaaatctgagatgcttgatactgtg attttctacaaggtaggaaagttttatgagctctaccacatggatgctgttgttggggtt aatgagctggccctgacttttatgaaggggacatgggcgcactcgggcttcccagagatc ggctttgcacgtttttcaaacgtgctggttatgaaaggctacaaggtggcccgcgtagag cagacggagaccccagagatgatggaagctcgctgcaagaccatggcaaaacccacaaaa tttgaccgtgtggtgaaaagagaagtgtgccggattatcacgcgtgggactcaaacctac agcgtgctggacggagctccttcagagagtcaaagcaaattcctcctgagtttgaaagaa aaggccgaagatgaaagctctggtcgataccgcacctacggcgtctgctttgtggacact tccgtgggacgtttccacatcggtcagttctcagatgatcgtcactgctcgcgcctgcgc actctgatttcacacttttctcctgctgaggtcctttttgaaaaaggtaacccatctgtt gaaacgcggaaaatactcaaggcgtctctgtcctctgctctgcaggaaggacttaatgca ggtacacagttctgggatgctcagaagactcttaagagcctttcagaggagaactatttt caagaggtctctggagaggagcagggcgctgggaacagtcttctccctgctcttctgaaa aagatggcctctgagagtgactcgctgtgcttgactcctaaagaagggtgtgaactggcg ctgtcggctttcggcggatgcatattttacctgaagaaatgtctcatagacaaagagttg ctttctatggccaattttgaggaatatgtccctgttgatgttgagatggagaaagctgcc ggacccacgagtttttttgctcagactcgtcagcgcatggtcctggatggagtgactctg gcgaacttggaaatctttcagaatggctcaggaggaacagacgggactctgctggagcgt ttggacacttgctctaccccgtttggcaagaggctcctgaagcagtggctctgcgctccg ctgtgtaaccccacatctatcaaggacagactggacgcggtggaggacctaatgggagct caggctcaagcaactgaagtctcggaccttctgaagaagcttccagacctggagcgtcta ctgagtaaaatccacagcattgggactccactgaagggccaggaccaccctgacagcaga gcagttctctacgaggacgtcacttacagcaaacgcaagataacagacttcctgtctgcg ttggaaggtttcaaaactatgcaggagatcatttctgtcgtcgctccagtttcagaggag tttcgttccacgttgctccttcaggttgtcagtctgaagacggaaaagaatggcctcttt cctgatctctcagcagaactcaagcgctgggagacggctttcgatcaccagaaagcccgc tctactggtgtcataacccctaaagcggggtttgaccccgagtacgaccaggccctcgca ggaatcaagagctgtgagcgagagctgcaggattacctggagaggcagaagaagcgactt ggctgtaagagcatggccttctggggaactgggcgaaatcgctttcagatggaagttccc gacagcgtctcggagaggaacatccctgaggagtacgacgtgaagtctacaaagaaaggc tgcaagcgttacgtcacaaaggagtccgagcgtctgttctccgagctgcagaggtttgag gagaagagggacgctgctctgaaggactgcatgaggaggctcttctacaactttgacaag aactacagagactggaagacgggcgtggagtgcatggccgtgcttgatgtgctggtggct ctgtcacgctacagtcaagggggagacggagcgatggccaggccgcaggtggtgctgccg gaggacgacagccaggtggtgcccttcatcaacctcactggctcccggcacccgtgtgtc acaaagacttttttcggtgacgacttcattcccaacgacgtcttcatcggctgccctgga ggcagtggaagtgaggaggtggaaggttgcgcctcgtgcgttctggtcacgggaccgaac atgggcggtaaatcaaccctcatgcgacaatgtggacttgtgatcatactggctcagctg ggatgttatgttcctgctgagagcctccgcttcacgcccgtcgaccgagtcttcacccgg ctgggagcttcagatcgaatcatggctggagagagcaccttctacgtggagctgagcgag accgcctccatcctgcaccacgccacgaaacattcacttgtgctcctcgatgagttgggg aggggcaccgccacgtacgacggcacagccatcgccagtgctgttgtgaaggagcttgct gagaaaatctgctgtcgcacacttttctctacacattatcactccctggtggaggactac accaacaatcctgctgtgcgtttaggacacatggcctgcatggtggagaacgagtgcgag gatccgagtcaggagacgatcacgttcctctacaagttcatcaccggtgcttgtccaaag agctacggtttcaacgccgcgcgtctcgccaacctgccagaggaggtgatccagtccgga cacaggaaggccaaagagtttgagaggagcaccatcagcctcagactattcaagaaactc tgtcagtttgctgaggactctactttggacagtacacgctttacctcactggtacaactg ctcaacacgctgtaa

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