Nematolebias whitei (Rio pearlfish): 119418014
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Entry
119418014 CDS
T08042
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119418014 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nwh04052
]
119418014 (lft1)
Cytokines and neuropeptides [BR:
nwh04052
]
Cytokines
Transforming growth factors (RSTK binding)
119418014 (lft1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
119418014
NCBI-ProteinID:
XP_037541186
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All DBs
Position
12:8292265..8295041
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AA seq
357 aa
AA seq
DB search
MDCVRVLLQCAALLGLSGAFSHQDVKDALLQKLGLDQVPHIHKRDLENLVIPARMKNKYS
SLLKVQGSRMRRSVPSLAGILRGAPGSADVSGEFVYSDATRHRMVFNMEARIPENSEVTM
AELKLYQRPSHHKRFTAERRSHRPVSSAMVSIYWVEVLPGGSNRTALVDSRLVPIHETGW
KSFDVTQAVHYWSKMQQHATLMHLEVWIEPERPGSHAAEMARSVRFTTEQQPDMEKPELV
LYTLSLEEYGSGGDCDVNPKRGVCCREQYFIDFSSLTWTQYWIIEPAGYQAYRCTGGCKQ
PQRSHGYGERRCVVSESSTLPIMYLVKKEDHTEIEVAEFPNMIVEKCACMLDNVSLV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgtgcgtgtgttgcttcagtgcgcggctctgctcggcctctccggggccttc
agccatcaggacgtgaaggacgcgctgctgcagaaactcggcctggatcaggttcctcac
atccacaaacgggacttggagaacctggtgataccggcgcgcatgaaaaacaagtactcg
tccctgctgaaggtgcaaggcagcaggatgcgcagatctgtgcccagcctggcgggcatt
ctgaggggggcccccggcagtgcagatgtctccggggagttcgtgtactcggacgccacc
cggcaccgcatggtgttcaacatggaggccaggatcccggagaacagcgaggtgaccatg
gccgagctgaagctctaccagcgaccttctcaccacaagcgcttcacggcggagcggagg
agccaccggccggtgagcagcgccatggtgagcatctactgggtggaggtgctgcccgga
ggctccaaccggacagccctggtggattcacggctggtccccattcacgagaccggctgg
aagagctttgacgtcacccaggcggtgcactactggtccaagatgcagcagcacgcgacc
ctcatgcacctggaggtgtggatcgaacccgagagacccggaagccacgctgcagagatg
gccaggagtgtccgctttaccaccgagcagcagccggacatggagaagcccgagcttgtc
ctctacacgctcagcctggaggagtacggctctggtggtgactgtgacgtaaacccaaag
cgaggcgtgtgctgcagggagcagtacttcatcgacttcagctcgctcacctggactcag
tactggatcatcgagccagccgggtaccaggcctacaggtgcaccggaggctgcaaacag
ccccaacgcagccacggctacggggagcggcgctgcgtggtgtcggagagctccacgctg
cccatcatgtacctggtgaagaaagaggaccacaccgaaatcgaggtggccgagttcccc
aacatgatcgtggagaagtgcgcgtgcatgctggacaacgtgtcgctcgtgtga
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