Nematolebias whitei (Rio pearlfish): 119418024
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Entry
119418024 CDS
T08042
Name
(RefSeq) homeobox-containing protein 1
KO
K24885
homeobox-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119418024
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119418024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
MCLC
AbiJ_NTD3
DUF494
HTH_37
HTH_31
NOC3p
Motif
Other DBs
NCBI-GeneID:
119418024
NCBI-ProteinID:
XP_037541197
LinkDB
All DBs
Position
12:complement(10198742..10242530)
Genome browser
AA seq
495 aa
AA seq
DB search
MSDFSEEPRFTIEQIDLLQRLRRTGMTKQEILHALDTLDRLDREHGDKFGRRTSSSSYLV
GGVNSCTNNSTATFNSNVTASATATSSASCNGSNSGEGSGVDHSATASSTTSKVSTATQT
QFSTGGGHSPSPSNSYDTSPPPGPPPPSAILPSPVSLVALSQNGRDSLAATPNGKLSPPR
YPVNSAAASRAFGFEAAEEDLDIDDKVEELMRRDSSLVKEEIKSFLGNRRISQAVVAQVT
GISQSRISHWLLQHGSDLSEQKKRAFYRWYILEKTTPGATLNMRPAPLPLEEMEWRQTPP
PLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACNAVIQKPGKKL
SDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHSNSDDIDGNDFSDQ
ACDLPYFDKRPLSRQFGLYRLEPTSPTQDDSGAHSEHQDPISLAVEMAAVNHTILALSRT
GGVPNDIKTESLEDE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcagcgaggagccgcgcttcaccatcgagcagatagatctgctgcagcgg
ctgcggcgcaccggcatgaccaagcaggagatcctgcatgctctcgacacgctggaccgg
ctggaccgggagcacggtgacaagttcggccgccgcacctcctcgtcctcctacctcgta
ggcggggtcaacagctgcaccaacaactccaccgccacgttcaacagtaatgtcactgcc
tctgcaaccgccacctcttccgcgtcatgcaacggtagcaacagcggcgagggcagcggt
gtcgaccactccgccaccgcttcctccacgacctccaaagtctccacagccacgcagacg
cagttcagcactggcggggggcattcaccgtcccccagcaacagctacgatacctctcca
cctccagggccgccgccaccctctgccatcttgccttcaccggtgtccctggtggcgctg
tctcagaatggccgtgacagtctagctgctacacccaacgggaagctgtctccaccacgg
tatcctgtgaacagcgcagcggcgtcccgagcgttcgggtttgaagctgcagaagaagac
ctggacattgacgataaggtggaggagctgatgagaagggacagcagtttggtaaaagaa
gagatcaaatctttcctggggaaccggaggatctctcaggctgtggtggcacaagtaaca
ggcatcagtcagagcaggatctcccattggctgctgcagcacggctccgacctgagcgag
cagaagaagagagccttctaccgctggtacatcctggagaaaacaacgccaggtgcgact
ctgaacatgcggccggctccgctgcccctggaggagatggagtggagacaaacccctccg
cccctcaccacagctcccggaactttccggctacgccgaggaagccgcttcacgtggagg
aaagagtgtctggctgtgatggagagctacttcaacgacaaccagtatccagatgaggcc
aaaagagaggagatagccaacgcctgcaacgctgttattcagaaaccagggaagaagctg
tctgatttggagcgagtcacctccctgaaagtttacaactggtttgccaatcgtcgcaaa
gagatcaagagacgggccaatattgaagccacaatcctggagagccatgggatagacgtc
cagagtccggggggacactccaacagtgatgacattgatgggaacgacttctcagatcag
gcctgcgaccttccttactttgacaagagacccctgagccgacagtttggcctttacaga
ctggagcccacctcaccaacgcaggacgacagtggcgcgcacagcgagcaccaggacccc
atctctctggccgtggagatggctgccgtcaaccacaccatcctggctctgtcccggacc
ggaggggtgcccaacgacatcaagacggagtccctggaggacgaatga
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