Nematolebias whitei (Rio pearlfish): 119418040
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Entry
119418040 CDS
T08042
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119418040 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nwh03051
]
119418040 (psmc6)
Proteasome [BR:
nwh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119418040 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
AAA_2
RuvB_N
PRS7_OB
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
TIP49
RNA_helicase
AAA_18
AAA_3
NPHP3_N
Mg_chelatase
AAA_24
Csa3_N
bpMoxR
AAA_28
DUF5906
TsaE
NACHT
AAA_25
AAA_17
ATPase
Parvo_NS1
IstB_IS21
ATPase_2
DUF3606
GAS
Motif
Other DBs
NCBI-GeneID:
119418040
NCBI-ProteinID:
XP_037541214
LinkDB
All DBs
Position
12:complement(16378137..16400827)
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AA seq
389 aa
AA seq
DB search
MADSREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVGDSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcaagagaaaaagcgttgcaagattataggaaaaaactattggaacacaaa
gaagttgacggacgattgaaagaactgagagagcagctgagagaacaaaccaaacagtac
gagaaatcagagaatgacctgaaggctttgcagagtgttggacagattgttggagaggtg
ctgaaacaactcacagaggagaaattcattgtaaaggccactaatggtcctcgatatgtg
gtggggtgtcgcagacagttggacaagtcccagctgaagcccggcaccagggtggctctg
gacatgaccacgctcaccatcatgaggtacctccccagggaggtggatcctctggtctac
aacatgtcccatgaagacccaggcagcgtctcctactccgagatcggaggactgtctgaa
caaatccgtgagctcagagaggtgattgagctgcctctgacgaaccctgagctctttcag
agggtgggcatcatcccccccaaaggctgcctgctttatggacccccaggaactggaaaa
actctgcttgctcgagccgtggccagtcagctggactgtaacttcctgaaggtggtgtcc
agctccatcgtagacaagtacattggtgagagtgcgcggctcatcagagagatgtttaac
tacgccagggaccaccagccgtgcatcatcttcatggatgagatcgatgctataggcggt
cgtcgtttctctgagggaacttcggctgacagagagatccagagaactctgatggagctg
ctgaatcagatggatggatttgacacactacacagagtcaagatgatcatggccaccaac
agacccgacacgttggaccctgctctgctgcggcccggcagactggaccgtaaaatccac
atcgagttacccaatgagcaagcccgtctagacatcctgaagatccactccagtcccatc
accaagcacggagaaatagattttgaagctattgtgaaactctcagatggtttcaatgga
gctgatctcagaaacgtgtgcacagaagcaggactgtttgcgatccgctccgatcgggag
tatgtcactcaggaggattttatgaaagcagtgaggaaggtgggcgactccaaaaagctg
gagtccaagttggactacaaacccgtataa
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integrated database retrieval system
