Nematolebias whitei (Rio pearlfish): 119418048
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Entry
119418048 CDS
T08042
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119418048 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Other domain-containing proteins
Patched domain-containing proteins
119418048 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
119418048
NCBI-ProteinID:
XP_037541223
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All DBs
Position
12:complement(17300369..17374164)
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AA seq
915 aa
AA seq
DB search
MSHVLGLWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFHPER
DLEVLVAPTHSLAKIERSLANSLFPIDRSKNKLYSDLHTPGRYGRLILLARSGGNILELA
DQVLRVHEQVLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITILEDIRQAVLSNSTFH
KVPLSYPNTTLKNGRVSFIGHQLGGVPFSPNSRDQQVKFARAVQITYYLRNHGPVVQDAI
AERWENEFCAMVNRLSMAEPPHATDQIHIQSLTSFSLWRDFHQTGILAKGEVLVSLVLVL
LAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFFAMGHG
TKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIESVK
IFCQCMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWFKTM
MSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGCLQI
SDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKTLSHGF
NKISWIDNFFHYLRLVNVSASTKSDFINILKGSFLRSPEYQHFTEDIIFSKNRETDEYDI
IASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSSSVISPILT
SGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISILCLIYTLN
FAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVFVPSNLTYT
LFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREREEI
ECIEVRENPDHVTNV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgtgcttggtctatggaggatgctgcggcaggtgatccacagagggctcaag
gcttccttctactggctgggcttgttcgtcagcagacaccccgtcttcttcctcaccgtc
cccgccgtgctcaccatcatcttcggctccacggtgctgagccgcttccacccggagcgg
gacctggaggtgctggtggctccgacccacagcctggccaagatcgagcgcagcctggcc
aacagcctgttccccatcgaccgctccaagaacaagctgtactcggacctgcacacgccg
ggcaggtacggcaggctcatcctgctggcccggtccgggggcaacatcctggagctggcc
gaccaggtcctgcgggtccacgagcaggtgctggacctgcgcgtcaactacaagggcttc
aactacacgttcgcgcacctgtgcgtgctgagccaccgggacaagcgctgcctgctggat
gacatcattaccatcttggaggacatccggcaggctgtgctgtccaacagcaccttccac
aaggtgcccctcagctaccccaacaccaccctgaagaatggacgtgtgtctttcattgga
caccaactgggtggcgtgcccttctcgcccaacagccgtgaccagcaggtcaagtttgcc
cgtgcggtccagatcacctactacctccgtaaccacggacctgtggtgcaggacgccatc
gcagagcgttgggagaacgagttctgcgctatggtgaacaggctatccatggctgagcca
ccgcatgctactgaccagatccacatccagtctctcacctccttcagcctctggcgggac
ttccaccagactgggatactggccaaaggggaagtcctggtcagccttgttctggtgctc
ctggctgccaccatctctagctccatgcgggattgcctgagggggaagcctttccttggc
cttctgggggtgctgaccatttgcatcgccaatgtgacggctgcagggattttcttcata
tctgatggaaagttcaactccaccttgctggggatcccattctttgccatgggtcatgga
accaaaggcgtctttgaactgctggcaggctggaggagaacaagagaaaacttgcccttc
aaggagcgtgtggctgatgcgtttgctgatgtgatggtgtgctacacaatgaccagctct
ctctacatcatcacttttggcatgggagctagcccttttacgaacattgagtcggtgaaa
atcttctgccagtgcatgtgcgtagccatcctggtgaactacttctatgtattctctttc
tatggctcctgcctagtgtttgcaggacagcttgagcagaaccgctaccacagtgtcttc
tgttgtaagatcccgtcagtggagtacttggaccgccagccaacgtggtttaaaaccatg
atgagtgatggccatgacctctccacacatcatgacagtgtaccataccagaatcacttc
atccagcacttcctacgagaacattacacggagtggattaccaacacctatgtgaaacca
tttgtggtcatattatatctcatttatgcctcgttttcattcatgggatgtttacaaata
agtgatggatcaaatatcgtaaaccttttggccagtaactcaccaagtgtttcatatgct
ctgacccaacagaagtacttcagtaattatagtcctgtgattgggttttacatttatgaa
cccattgagtactggaactccacagtgcaggagcacctgaagactctgagtcatggcttc
aacaagatttcctggatagataactttttccactacctgcggttggtaaatgtgagtgca
tcaacaaagagtgacttcatcaatattttaaagggttctttcctgcgcagcccggagtac
cagcacttcacagaggacatcatcttctccaagaaccgtgagactgacgaatacgacatc
attgcatcacggatgtacttggtagcacggaccacagagaagaagcgggaggaggtggtg
gagcttttggaaaagctccgtcccttgatgctgatcaacagcatcaaattcattgccttt
aatcccacatttgtttttatggatcgctacagttcgtccgtcatctcacccattctgacc
tcaggtttcagcgtactcaccatcctcatcctcactttcttcctggtcatcaaccccttg
gggaacttctggctcattctcacagtgacatctgtggagctgggtgtgttaggtttgatg
accctctggaatgtcggcatggacagcatttccatcttgtgccttatttacactctcaat
tttgccatggatcactgtgcaccacacctgtacacttttgtgcttgctacagagcacaca
aggacacagtgcatcaagttggcactggaggagcatggggcggccatcttgcagaacaca
tcctgctttgtgatcgggatcatgcctctagtgtttgtgccttccaatttgacctacaca
ctgttcaagtgctccctactcactgcaggctgcactttgctgcactgcttcgtcatcctg
cctgtcttcctgaccttcttcccgccatccaaaaagagacataagaaaaaaaaaagagcg
aagcggaaagagcgggaaagggaaagggagcgagagagggagagagaaagagaggagata
gagtgcatcgaagtcagggagaatcctgatcacgtgacaaatgtttga
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