Nematolebias whitei (Rio pearlfish): 119418062
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Entry
119418062 CDS
T08042
Symbol
vcla
Name
(RefSeq) vinculin a isoform X1
KO
K05700
vinculin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04510
Focal adhesion
nwh04520
Adherens junction
nwh04810
Regulation of actin cytoskeleton
nwh04820
Cytoskeleton in muscle cells
nwh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119418062 (vcla)
04520 Adherens junction
119418062 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119418062 (vcla)
04810 Regulation of actin cytoskeleton
119418062 (vcla)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119418062 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119418062 (vcla)
04147 Exosome [BR:
nwh04147
]
119418062 (vcla)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119418062 (vcla)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119418062 (vcla)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
119418062
NCBI-ProteinID:
XP_037541240
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All DBs
Position
1:54763965..54792649
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMNTIKELLPVLISAIKIFVATKSGRGAGVEEAERNRKFTFEKMSAE
IIEIIRVLQLTTWDEDAWANKKDMEALKRSLALIESKLGQAKSWLKDPHGQPGDPGEVAL
RVILDEAGKVGELCAGKERKDILATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQG
LDLLFGKVDSAAHRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSINEIAGLTARLVELRKQGKGDSPEARALAKQIGAALLTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVECERLQWITGQAAIRGMVGEGKRLA
GGLLGPYRQDMVGRCDRTEALMNALADMASRGEAEAPHARATAAQLQDTLKDLRQHMQEV
MTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFEERAGNFETHAGRLGATAEKAAAV
GTGNKSTVEGIHAAVKHARELTPQVTSAAQILLKNPGNKAAYEHFDTMKNQWIDNVERLT
GLVDEAIDTKSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKRE
VDNSEDPRFRDTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGK
VREAFQPQEPDFPPPPPDLDQLHVSDEQVPPKPPLPESEVPPPRPPPPEEKDEEFPEQKA
GEVVSEPMMVAARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSN
QPVNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacaccaagaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacgggaaagccatcccggatctg
tcggtgccggtggccgcggtgcaggcggctgtcagcaaccttgtccgggtggggaaggaa
acggttcaaaccacagaggaccaggtgatgaagagagacatgcctcctgcgttcattaag
gtggagaactccagctcgaagctcgtccaagcggctcagatgctcaaagcagatccatac
tccgttcctgcccgggactacctgatcgatggatccagagggatactgtctggaacgtcc
gatctgctccttacctttgatgaagcagaggtgcgtaagataattcgtgtgtgtaaaggt
atcctagagtatttgacggtagctgaagtggtggagaccatggaggacctcatcacttac
accaaaaacctcggcccagggatgacgaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaggagcacaggcagatgctcgtcaactccatgaacaccatcaaggag
ctgctgcccgttcttatctcagctataaagatttttgttgcgacaaagagcggccgagga
gccggggtggaggaggcagagaggaacagaaagttcacctttgaaaagatgagcgctgaa
atcatcgagatcatcagagtcctacagctcaccacgtgggatgaagacgcctgggccaat
aagaaggatatggaggctttgaagagatctctggctttgattgagtcaaagttgggacaa
gctaaaagctggctcaaagaccctcatggacagccaggagaccctggcgaggtggcgttg
cgtgtgatcctggacgaagctggtaaggtgggagagctgtgtgctgggaaggagagaaaa
gacatactggcgaccactaaagctctgggacagatgacggaccagattgcagatctacga
gccaggggccagggtccaacaccagggtgcgttcaacgtgcaggccagtgctcacagggc
ttagatttgctttttggcaaagtggacagtgctgctcacaggctggaagctctaatcaat
gccaagcaggccattgctagaaggctggatgctgcacaggcatggctggccgatcctaat
ggtggtcctgaaggagaggagaacatcagagccctgcttgctgaggccaaacgcatcgct
gacctttgtgaagaccccaaagagcgagacgacatcctgcgctccataaatgagattgca
ggactcactgcccggctcgtagagctacgcaaacagggtaaaggcgacagcccagaggcc
cgcgctctggcaaagcagatcggagcagcgcttcttaccctgcagtccaaaaccaatcgg
gccgtggccaacatgagaccagcaaaacctgctgtcactttggaggggaagatggagcag
gccctccgctgggtgaacaacccaggggtggatgacagaggtgtagaatgcgagaggcta
cagtggatcacaggtcaggcagcaatcagagggatggttggggaagggaagaggctggca
ggaggcttgttaggcccatatcgacaggacatggttgggcgctgcgaccgaacagaagca
ctgatgaatgctttggcagacatggcaagcagaggggaggctgaggctcctcacgcacgt
gctacagctgcacagttgcaggacaccctcaaggacttgaggcagcacatgcaggaggtg
atgacccaggaggtgtcagatgttttcagtgacaccaccacacccatcaagctgctggca
gtggctgcaactgctcctcctgatgccccaaacagagaggaggtttttgaggagcgtgca
gggaactttgagacccacgcaggccggttgggagcgaccgcagagaaggctgccgctgtg
ggaacgggtaataaaagcacagtagagggcattcatgctgctgtgaaacatgccagggag
ctgacaccacaggtgacctctgctgctcagatcttgttgaagaatcctggtaacaaagca
gcatatgagcactttgacaccatgaagaaccagtggattgacaatgtggaaagactgact
ggtctggttgatgaagccatagacaccaaatctctattagatgcttctgaagaggccata
aagaaagacattgacaagtgtcgagttgccatggccaatgttcagccccaaatgcttgtt
gccggggcaacaagcatagcaagacgagctaatcgggtcttgttggtggccaagagagaa
gtagataactctgaagatccacggttcagagacactgtgaaacatgcctcggacatcctc
tcacacaccatctcccccatggtgatggatgccaaggcggtggctgggaacatacaagat
aaagctttacagaaagcatacttggactcatgtctgagaattctggctgcagttggaaaa
gttagagaagccttccagcctcaggaaccagacttccctcctcctcctcctgacctggac
cagctccacgtcagtgatgagcaagtgccaccaaagccccctttgccagaaagcgaggtg
ccacctcctcggcccccgcctccagaggaaaaggatgaggagttcccggaacagaaggct
ggcgaggttgtcagtgagcccatgatggtggcagccaggcagctgcatgacgaggcacgc
aagtggtccagcaagcctgaggatgaggaggcagtagaggagagggaggtagatgatgaa
gatgagtttactgatggtgaggatgactatgagccagaactgctgatgatgccgtccaac
cagccagtcaatcagcccattctggcagctgcccagtctctccaccaggaggctcgcaag
tggtccagcaagggtaacgacatcatcgcagcagccaagagaatggctctgctgatggct
gagatgtctcgccttgtgcgcggcgggagcggaaacaaacgagcgctgattcagtgcgcc
aaggacatcgccaaggcctccgatgaggtgacgaggttggctaaagaagtggccaagcag
tgtacggacagacgcatcaggactaacctgctgcaggtctgtgaacgaattcctaccatc
agcactcagctgaagatcctgtctacagtcaaagccaccatgctgggacgaacaaacatt
agtgaagaggagtcggagcaggccacagagatgctggtccataacgcccagaatctgatg
cagtcggtaaaggagacggtcagagaagccgaggcagcgtccatcaagatccgcacggat
gcaggattcaccctgcgatgggtgcggaagaccccctggtaccaatga
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