Nematolebias whitei (Rio pearlfish): 119418089
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Entry
119418089 CDS
T08042
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119418089 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119418089 (lrfn5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
LRR_1
ig
Ig_2
LRR_9
Sp38
C2-set_2
DHU1_N
fn3
Ig_5
Motif
Other DBs
NCBI-GeneID:
119418089
NCBI-ProteinID:
XP_037541270
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Position
12:complement(26046788..26057081)
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AA seq
799 aa
AA seq
DB search
MESLLVYLIVLGVAVKAHKVQICPKRCNCQVLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPYAFKDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHIGAFNDLTALEELDLSYNNLESVPWVAIQRMSNLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTLRCKARGDPDPNVHWIAPDGRLMSNSSRAVVHADGTLEILISTVKDSGSFTC
VASNAAGEAQQTVELVITKLPHITNNSISDQEPDPGSSDIATVSKTGSEAGGGVPLGNAK
TSQEKKVVIAEAHSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKDILVN
NLAAGAHYDLCVLAIYDDLVTSLTATRVIGCVHFSTEPQYLSCHFMQSQFLGGTIVVVIG
GIIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRP
EKNDKDCLRVALPPLEPTKQRAPVAVPTTKPSVPDCTVSTSAGSHSWHPASPGAPRPKRS
GAPPKPSEARRAEAQADVELNNMNRNNSSEVKMATAVAVPAPGQPVKWTAAPRGPRPHQA
SRHYMTVPAGGVRVNRRHSLNADSYRERCYMAYPKTGASLRSKRSLSMSGELPQLESTTN
IHRARDKLSKSEWLLESTL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctcctggtgtacctgatagtccttggtgtggctgtaaaggcccacaaagtg
caaatctgccccaaacgctgcaactgtcaggtactcaaccccaatctggcgactctgtgc
gacaaaaagggtcttctgttcgtgccgccgaacatcgacaggcacacggtggaaatgcgg
ctcggggacaactttgtaaccagcattaaacggaaagactttgcgaacatgaccaagctg
gtggacctgactctctcccgtaacactattgggtccatcgcaccgtacgccttcaaagac
ctggagaacctacgagcccttcatttagacagcaaccggctgacccgcataaccaacgac
accttcagtgggatgtccaagctgcaccacctcatcctcaacaacaaccagctcacccac
atccacattggggccttcaatgacctaacagcactggaggagctggatttatcatacaac
aacttggaaagtgtcccatgggtggccattcagaggatgtccaatctccatacgctcaat
ttggaccataacatgctcagcctgattccagagggaacgttttctgggcttcagaagctc
aagaggctggatgtgacctccaacaagctccagaagcttcctcccgaccctgttttccaa
agagcaggggtcctggccacctctgggataatggggccttcgtcgttcgcactgagcttc
ggagggaacccgctgaggtgtaactgcgaactgttgtggctgcggcggctgcggagggag
gacgatctggagacctgcgcttcaccacaacacctggctggacgctacttctggacagtt
tcagaggaagagttcctgtgtgagcctcctctcatcaccaggcactctcaggagctgaga
gctttagagggtcagagcgtgactttgcgctgcaaagccagaggtgaccccgaccccaac
gtccactggattgcaccggacggacgcctcatgtccaactcctccagggcggtggtccac
gcagacggaacgctggagatcctcatcagcaccgtcaaggactcgggttccttcacctgc
gtggcttccaacgctgccggagaggcccagcagacggtggagctggtcatcactaaactc
cctcacatcaccaacaactcaatatcagatcaggagccggaccccgggtcatcagacatc
gccacggtgtccaagacgggctcagaggcaggtgggggggtccctctggggaatgccaag
acgagccaagagaagaaagtagtaattgccgaggcccattccacttcagcgctggtcaag
tttaacttccacaggagtattcctggaatccgcatgtttcaaatccagtataacgggacc
tacgatgactcactggtatacagaatgatccctcccaccagtaaagacatcctggtgaac
aacctggcagcaggtgcgcactacgatctgtgcgtgttggcgatctatgacgacctggtg
acttctctgacagccaccagggtgattggttgcgtccacttttccacggagccacagtac
ctgagctgccacttcatgcagtctcagtttcttggcgggaccatcgttgtcgtcattggg
gggatcattgtggcctctgtgcttgctttcattatcttcctcattgtgcgctaccgagtg
tgtaaccaaggagatgcagataaggctctggagatgggggatattcgatcactgagcagt
gatggacaactacaaggctgtgggatccccaagtccctgtctaagcaggtcctacgtcca
gagaagaatgacaaggactgcctcagagtcgcccttcctcccctggagccaaccaaacag
cgagcgcctgttgccgtgcccaccacgaaaccttctgtccccgactgcacagtctctacc
tctgctggaagtcatagctggcacccggcctctccaggagccccgaggcccaaacgctct
ggagccccaccgaaaccttctgaggctcggcgagctgaagctcaggcagacgtagagctc
aataacatgaaccgtaataactcttcagaggtaaaaatggccaccgccgtcgctgttcct
gcgcctggccagcccgttaaatggactgctgctcccaggggtccgcggccccaccaagct
tctcgacattacatgactgtgccagcagggggagtgagagtgaaccgcaggcactcgctc
aatgcagactcgtacagggagcgctgctacatggcctacccaaaaaccggggccagtctg
cgctccaaacgcagcctgtcgatgagcggagagctgccgcagctcgagagcacaacaaac
attcaccgagctcgagacaaactgtccaagtcggagtggctgctggagagcactttatga
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