Nematolebias whitei (Rio pearlfish): 119418219 Help Entry 119418219         CDS       T08042                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh03040   Spliceosome Brite KEGG Orthology (KO) [BR:nwh00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     119418219 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:nwh03041]     119418219 (cdc40) Spliceosome [BR:nwh03041]  Complex C   Other components    Step II factors     119418219 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 PQQ_2 Motif Other DBs NCBI-GeneID:  119418219 NCBI-ProteinID:  XP_037541403 LinkDB All DBs Position 12:34399047..34424495 Genome browser AA seq 581 aa AA seqDB search MSAAISSLASYGSDSDSENESESSTSVRKVDSVEPDATAHLKPLQSGSAMSLSVLNSAPE VAVKESVETGTHLDPSLKEVSYNPTFETMFAPEFGPVNPYRTQQMAAPRNMLSGYAEPAH VNDFMFEQQRRTFSSFGYALDPSVDTHQLSSTSYIGAVDEAEKNKGLTVFETGQKKSEKR KKVKGGDAGEIDSFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKNEEEAPGEEK TILHVKEMYDYQGRSYLHVPQDVGINLRSPDAPDKCYLPKKQIHVWSGHTKGVSAIRLFP NSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNTGTQFLSAAYDRYLKL WDSETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTGEVVQEYDRHL GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC QSMDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atgtctgccgccatatcttccctcgcttcttacggtagcgattctgattctgaaaatgag tcagagtccagtaccagtgtcaggaaagttgactcggtggaaccggacgctacggctcat cttaaacctttacagagtggatccgcaatgtctttgtctgttttaaattcggcccctgag gtcgccgttaaggagtctgtcgaaactggcacacacttggacccttcactaaaagaagtc tcctataacccaacatttgaaaccatgtttgcacccgagtttgggccagtaaacccatat aggacccagcagatggctgctcccagaaacatgttatctggctatgcagaacctgctcac gtcaatgactttatgtttgaacagcaaagaaggacattctcctcatttggttatgcttta gatccttctgttgacacacaccagttatcctccaccagctacattggtgcagtggatgag gctgagaaaaacaaaggactgactgtgtttgaaactggtcagaagaagtcggagaaacga aagaaggtcaaaggtggagatgcaggagaaattgacagcttccttgggccatgggcgaaa tatgtggatgagaaagatgtggccaaaccttcagaggaagagcaaaaagaactggatgaa atcacagccaaaaggcagaagaaaggaaagaatgaagaagaggctcctggagaggagaag accattctccatgttaaagagatgtatgactaccagggcaggtcataccttcatgtccca caggatgtgggcatcaacttgcggtccccggatgctccggataaatgttacctcccaaag aaacagattcatgtctggtctggacacaccaagggtgtcagtgctatccgattattcccc aactctggtcatctgctgctctcctgctccatggactgtaagatcaagttgtgggaggtg tatggcgagcggaggtgtcttcgtacatttatcggtcacagcaaagcagtgcgagacatt tgcttcaataacactggaacccagtttctcagcgcagcgtatgatcgataccttaaactg tgggactccgagacaggccagtgtatcgcccgcttcaccaacaggaaggtgccatactgc gtcaagttcaacccagacgaagacaagcagaatctttttgtggctggcatgtcggataaa aagattgttcagtgggacatcaggacaggcgaggtggttcaggagtacgatcgccacctg ggtgctgtcaacaccatcacctttgttgatgagaaccgccggtttgtcagcacgtcagac gacaagagtcttcgagtttgggagtgggacatcccagtggacttcaagtacatcgctgag cccagtatgcactcgatgccagctgtgacactatctcccaatggtaaatggctggcatgt cagtctatggataaccagattcttatctttggagcccagaaccgcttcagactgaacaaa aagaaagtcttcaagggccacatggtggccggctatgcctgccaggtggacttctctcca gacatgagctacgtagtgtcaggggatgcagatggaaagctcaacatctgggactggaag accaccaagctctaccacaggatcaaggctcacgataaggtgtgcatcagcgccctgtgg catccgcacgaaacatccaaggtgatcacatgtggatgggatggacagattaaactctgg gactaa

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