Nematolebias whitei (Rio pearlfish): 119418240
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Entry
119418240 CDS
T08042
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119418240
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119418240
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
119418240
NCBI-ProteinID:
XP_037541426
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Position
12:complement(36003673..36013517)
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AA seq
885 aa
AA seq
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MGVHDLWSIVEPVRESVPLLSLGGKTLAVDLSLWVCEALHVQGMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKSETMSKRTETRYRGFKKSSCRSTNRGRFNAVLKECAEM
LDYLGVPWVTAAGEAEAMCAYLDSVDLVDGCITNDGDAFLYGARTVYRNFNMNSKDPQVD
CYQTSRVHTELHLSRENLVGLAILLGCDYIPKGVPGIGKEQALRLIETLKGQSLLTRFNQ
WKTVNSDELDVVVKKVSHCSICRHPGSAKAHERCGCELCDSRRFCQPQDFDYPCPCDWHC
YERTRQASSLEANIKRKTLASQQFPFTEIISEFLVPKDKPVSHFKRRQPNMFLMQKFAFD
KMEWPKHYTSEKVLVLMTYTELMNRKHKREVPSQIKPIRIFKPRVRNAVACFEIIWSTPE
HYVFPEDRPAADQHEVRTVEEESLVRIAFPEVVESYLRIKALAEENKTKKKKPKSKKETP
SDPSDGVLDLLDQLTLQSSSTQTQTLPPSTSYSEKTEVIVLDTPQSRKQLQEKREVCSIP
SRPLSRAESGDAASPSVSAVIDALHLSDIDWDTLSFTSSPTSQAETTVKDETQGGNGERA
PSSDVRQADSRPAAELCCTECPLRDRLLMRNAATNQTKKGSDVVSKHLIYELTLPASISQ
GKHGGEHSRKVKESVWNTKEPITNKSQTHSLKEQQILLLQTHNRTREESNGSKKPPQKYK
FVRTALSSSLPRCRSGPDQSDSKNRSVPPTTKKSVCSSLRSSSEDSDTENQPSGPRRQTK
PNKFESGFISDFPLKTVSDPFKSIEPNPEASHKRQGAVSQSGRGKIDGDASSESKWQGVQ
TSKECDDVFLQTPTSPVALFDSDDSVICSDSPLPLAERLRLKFLQ
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcacgatttgtggtctatcgtcgagcccgttcgtgagtcggttccgttgtta
agtttgggcggaaagactttggcggtagacctgagtttatgggtgtgcgaagctctgcat
gttcaggggatgatgggcagagtcacgaagccccatctgaggaatttatttttccgagtg
tcgtccctcactctgatgggggtaaagcttgtttttgtcatggaaggagaagctcccaag
cttaaatcggaaacaatgagcaagaggacagaaacgagatacagagggtttaaaaaaagt
tcttgcagaagcaccaacagggggcgctttaacgctgttctcaaagagtgtgcagagatg
ttggactacctgggtgtgccctgggtgacagctgccggggaggcagaggccatgtgtgct
tacctggactcagtggatctagtggacggctgcatcaccaatgatggggatgccttttta
tatggagcccggacagtctacaggaacttcaatatgaacagcaaagaccctcaggtggat
tgttaccagacttctcgagtgcacacagagttacatctgtccagagagaatcttgttggt
ctagccattctgcttggctgtgattacattcctaagggtgtaccaggtattggcaaagaa
caagcattacggcttatagagacactgaaagggcaatcgcttctgacgaggtttaaccag
tggaagacggtgaattcagatgagcttgatgtagttgtaaaaaaagtttctcactgcagc
atatgtcgacatcctggctcagccaaggcacacgagcgatgcggctgtgagctctgcgac
agccgacggttctgtcaaccgcaggactttgattatccgtgtccctgcgactggcactgc
tacgaacgaacccgccaggcctcgtctctggaggcaaacatcaaaagaaaaacactggca
agtcaacagttccctttcacagagatcatcagtgagtttctggttcccaaggataaacct
gtgtcacatttcaagagacgacagccgaacatgttcttaatgcagaaatttgcctttgac
aagatggagtggccaaaacactacaccagtgagaaggttttagtcttgatgacctacact
gagctgatgaacagaaaacacaaaagagaagttccctctcaaatcaagcccatccgaata
tttaaacccagggtgaggaatgctgttgcttgctttgaaatcatctggagcaccccagaa
cattacgtgtttcccgaggaccgacctgcagcggatcaacatgaggtgagaactgtggag
gaagagtcgctcgttcgcatcgccttcccagaagtggtggagagctacctcagaattaaa
gctctggctgaagagaacaaaaccaagaaaaagaaaccaaaaagtaaaaaggagacaccg
tctgatccctctgatggtgttttggatctcttggatcaactgactcttcagagctcttcc
actcagacacaaactttgcccccttccacttcgtactctgagaaaacagaagtgatcgtt
ctggacactccccagagtcgtaagcagcttcaggagaaacgagaagtctgctcgattccg
agtcgtccactctctcgagccgaatcaggcgatgctgcttcaccttctgtctccgctgtt
attgatgctttacatctgagcgacattgactgggacactctgtccttcacgtcctcccct
acctcacaagctgagaccacagtcaaggatgagacacaaggtggaaacggagaacgagca
ccatcgagtgatgtgagacaggcagactccagacctgctgcagagctctgctgcacagag
tgtcctctcagagacaggctgctcatgaggaatgcagctacaaatcagacaaagaaaggc
agcgatgtagtttcaaaacatctgatctatgagctaactcttcctgccagcatctcgcaa
ggaaagcacggtggagaacattcaagaaaagtgaaggaatcagtttggaatacaaaggaa
ccgattacaaacaaaagtcaaactcacagtttaaaagagcagcaaattctattattacaa
actcacaacaggacaagggaggaatcgaatggctccaaaaagcctccgcagaaatataag
tttgtcaggacagctctgtcttcttctctgccgaggtgccgctctggtccagatcaaagt
gacagtaagaacaggagcgtaccgccgaccaccaagaagagcgtgtgcagcagcctgcgt
tcgtccagcgaggacagcgatacggaaaaccagccttctggacctcgaaggcagacaaaa
cccaacaaattcgagagcggctttatttcagacttccctctgaaaaccgtttccgaccca
ttcaaaagtatcgaaccaaatccagaagcttctcacaagcgtcagggtgcggtatctcag
agtggcagaggaaagattgacggtgacgcatcgagtgagagcaaatggcagggtgtgcag
acgtctaaagagtgcgatgacgtgtttcttcagactcctacatcacctgtcgctttgttc
gacagcgacgattcggtgatttgcagcgacagtccgctgccgctggctgagagactgaga
ctgaaatttcttcagtga
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