Nematolebias whitei (Rio pearlfish): 119418305
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Entry
119418305 CDS
T08042
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b
KO
K06091
MAGUK p55 subfamily member 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119418305 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119418305 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
PDZ domain-containing proteins
MAGUK family proteins
119418305 (pals1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
SH3_2
L27
SH3_1
PDZ_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
119418305
NCBI-ProteinID:
XP_037541495
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Position
12:complement(39244117..39265500)
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AA seq
647 aa
AA seq
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MITSHMNGYVQEASGQAMSYRERAVDCPGQESSLVKSPQCSAHMERIQLYQEEMRKRREE
DKGKHDIDPNASLRLKKLSQNPMVGIDNPTFDGKEKVTNDTTCPDPVVELEELLQALKWM
QNCLHDAQSQQDVELIMQLLAKEEFRKAYMIYSAVSQQLNRASPTSPLTSQAQDLCQQVQ
RILQSSHQKEGLELSVLLTSPHLQALMQAHDSVAVQELAEETMTQYLGETVKLVRLEKAK
DTPLGATVRNDVESVVVSRVVKGGAAERSGLLSEGDEILEINGVAIRGKHINEVHDLLQE
MHGTLTFLIIPSSHVKPAPHRHTVMHVRAYFDYDPSDDPFVPCRELGLSFHKGDILHVIS
QDDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQRESLKKTITDKNQEQQGKLWSSKKSKKQ
KKRNTSNTNKDYDDLMTYEEMSLYHQPANRKRPVALIGPANSGHDELRRRLLSTGPDKFA
VAVPHTTRNPRIHERNGREYHFVSRSAFETDLATGKFIESGEYEKNLYGTSTDSVRHVVN
SGRICLLCLHTRSLRVLRSSNLKPYVIFIAPPSQERLRTLLVVEGKTPKPEELKEVIEKA
REMELKYSHFFDATIVNMDPDQAFLELLRVIDKLDTEPQWVPTSWLC
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcccatatgaacggttatgtgcaagaggcctctggtcaggccatgagctac
agagagagagctgtggactgtccaggtcaggagagtagcctcgttaaatcccctcagtgc
agcgcccacatggagaggatccagctttaccaagaagaaatgaggaagaggagagaggag
gacaagggaaagcatgacattgatcctaatgcttcgctcaggctcaagaagttgtcacag
aacccaatggttggcatcgacaatcccaccttcgatgggaaggaaaaggttactaatgac
acaacctgcccggatcctgtagtggaactggaggaattattgcaggctctgaaatggatg
cagaactgtttgcatgatgctcagagccagcaggatgtggagctgataatgcagctccta
gccaaggaggaattcagaaaagcctacatgatctactcagctgtgtcccagcagttgaac
cgagccagtcccacttcgcccctcacatcacaagcacaggacctctgccagcaggttcag
aggattctccagtcgagccatcagaaggagggtttggagctcagtgtgctgctcaccagt
ccccatctgcaggcactgatgcaggctcatgacagcgtggccgtgcaggagttggcagag
gaaactatgactcagtatcttggagagacggttaaattagtgcggctggagaaggccaaa
gacacccctttgggtgcaacagtgcgtaatgatgtggagagtgtggtggtgagtcgtgtg
gtgaaaggtggtgcggcggagcgcagcggcctcctcagtgaaggagacgagatcctggag
atcaacggggtcgccattcgtggaaagcatatcaacgaagtccacgacttgctgcaagaa
atgcatggaaccctgaccttcctcatcatcccgagttctcatgttaaacctgcccctcac
agacacactgtgatgcacgtacgagcttactttgactatgacccctctgatgaccccttc
gtgccatgtcgggagctgggtttgtccttccataagggggacatactgcacgttatcagc
caggatgaccccaactggtggcaggcctacagggatggagacgaggacaaccagcctctg
gctggactcatcccaggtaaaagtttccagcaacagagagagagcctaaagaaaactata
accgacaagaaccaagagcagcaagggaagttgtggagttcaaagaaaagcaaaaaacag
aagaagaggaacacctcaaacacaaacaaagactacgatgacctcatgacctacgaggaa
atgtccctctaccaccagcctgctaatcgcaaacggcccgttgctctgattggtccagca
aacagcggacacgacgagctgcgtcggaggcttctgtccacgggaccagacaagtttgcc
gtcgccgttccacacacaaccaggaacccaagaatacatgagcgaaatggacgcgagtac
catttcgtgagccgctctgccttcgaaactgacctggcgacggggaagttcatcgagtcg
ggggagtatgagaaaaacctgtacggcaccagcacagattctgtccgacacgtcgtcaac
tctggtcgtatctgtttgctctgcctgcacacgaggtcactgcgagtgttgaggtcctcc
aacctaaagccatatgtcatcttcatcgctcctccttctcaagagcgactgcgcactctg
ctggtcgtagaggggaagacaccaaagccggaggagctgaaggaggtcattgaaaaggcc
cgcgagatggagctcaaatacagccacttctttgacgccaccatcgtgaacatggatcca
gaccaggctttcctcgaactgctcagggtaatagataaactggacacggagccgcagtgg
gtgcccacatcctggctctgttag
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