Nematolebias whitei (Rio pearlfish): 119418314
Help
Entry
119418314 CDS
T08042
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119418314 (hps1)
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
119418314 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
119418314
NCBI-ProteinID:
XP_037541509
LinkDB
All DBs
Position
1:complement(56731255..56739078)
Genome browser
AA seq
669 aa
AA seq
DB search
MKCLLIASESAEVLFHWTDLDYQQNIQERYGAAQEEGEELPAFEDILSTLFAPIIISYST
MEDSYTSFTTADNHIYVLHQFDECLYIALNGDGEEKEDDLRRKLYVVKKMIDVMFGMVTL
SGTLLRKELRPQDTEQRTRLWKYLQSLIETYSHLRDNDQSFLVEAVERLIHPTLCEQCIE
FLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASILTTSDLLALIVMAQNLY
PSYVDLDDPSPEDVESTSGSGPESFYTPEPSPSSRDSSTGRGGTPVFEFVDPDIQMAEDS
LHTLEVGPPDPSTPRRVFLDVCLKDGLYPMMPHSMYCLPLWPGITLVLLTKIPNSAVAMS
VYKYLEDFNKLEKRLQEGQGSPAAARSPLNMYDVRSKLDKFIKALGPHEFQFAQLQSVWT
EFKNKAFAKGKSGFSRDLIPLCKKMKTQLCSIYRQCFLMDVPQRLSLGLQERAQAMVQEK
LMDWKDFLLVKSKRNITIVSYLEDFPGLIHFICVDRSSGQMIAPSLSITERTTSELGKGP
VAHHIKNKVWGLVRTTRRYLQKGYSTVTLRDGDFYFCYFLWFENETGYKLDSVDIPVLSD
DSPPIGVLACDYYKRLLRYYSKNYKDKVETVKCYELLTVHLGVIPTEIILQHCRQLASKL
WEPSRNPLL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgctgatagccagcgagagcgccgaggtcctttttcactggactgacctg
gactatcagcagaacatccaggagcggtatggagccgcgcaagaagaaggggaggagctc
cctgcctttgaagacatcctgagcactctgtttgctccgatcatcatctcctacagcacc
atggaggacagctacacctccttcaccacagccgacaaccacatctacgtgctacaccag
tttgatgagtgtctctacatcgctttgaatggagacggtgaagagaaggaggatgatctg
aggagaaaactgtacgtggtgaagaagatgatcgatgtcatgtttggcatggtcaccctg
agcgggaccctcctgagaaaagagctgcgtcctcaggacacagagcaaagaacacgactg
tggaagtatctgcagagtctcatcgagacctacagccacctccgggacaacgaccagagt
ttcttagttgaggcagtggagaggctgattcatcccactctgtgtgagcagtgcatcgag
ttcctggagcgccgcctggtgcagcagctcaacagcagcgtggagagggcaggagaggag
gttctgcacgccttcatcctggtccacactaaactgcttgctttctactccagccgcaac
gcaagtatcctcaccacctcagacctcctggcgctcatcgtcatggcccagaatctgtac
cccagctatgtggacctggatgatccaagtcctgaggatgttgagagcacatctggttct
ggtcctgaaagtttttacaccccggagccctcaccttccagcagagactccagcactggc
agaggaggaactcccgtgttcgagtttgtggacccagacatccagatggccgaggacagc
ttacacacactggaagtcggtccacccgacccttcaacccctcgccgggttttccttgat
gtgtgcctcaaagatggattgtatcccatgatgcctcactccatgtactgtctcccgctg
tggcctggcatcaccctggttctgctcactaagatccccaacagtgcagtagccatgtct
gtgtataaatacttggaggactttaacaagctggagaagcgtttacaagaaggccaaggg
agtcctgctgcagccagaagccctctgaacatgtatgacgttcgcagcaaactggacaaa
tttatcaaagctttagggcctcacgagtttcagtttgcacagctacagagcgtctggaca
gagtttaagaacaaagcttttgccaaaggaaaatctggatttagcagagatcttattccg
ttgtgtaagaaaatgaagacccagctgtgcagcatatatcgacaatgtttcctcatggac
gttcctcagcgcctctcccttggtctgcaggaacgagcccaggctatggtgcaagagaaa
ctgatggactggaaggacttcctgttggtgaaaagcaagaggaacatcacaatagtgtcg
tacctggaggatttcccaggcctcatccattttatctgcgtggaccgatcgagtggccaa
atgatcgctccgtcactcagcatcacggagcgcaccacgtctgagctgggaaagggacct
gtggctcatcatattaaaaacaaggtgtggggcctggtcagaacaacacggcgctatctt
cagaagggttattccaccgtcactctgcgtgacggagacttctacttctgttacttcctc
tggtttgaaaacgaaactgggtacaagttagactcagtggacatacctgtactatctgat
gactccccacccatcggggtgcttgcctgtgattactacaagaggttacttcggtactac
agcaagaactataaagataaagttgagactgtaaagtgctacgagctcctgacggtccat
ctgggggtcatccccactgaaatcatcctccagcactgcagacaacttgcaagcaaactg
tgggagccgtcacgcaacccgctgctgtaa
DBGET
integrated database retrieval system
