Nematolebias whitei (Rio pearlfish): 119418418
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Entry
119418418 CDS
T08042
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119418418
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119418418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Regnase_1_C
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
119418418
NCBI-ProteinID:
XP_037541621
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All DBs
Position
12:complement(2886934..2942490)
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AA seq
544 aa
AA seq
DB search
MDQQHIKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCHTRTHSDSSSPSSPQ
LVPRGCSPGPNRSRAGPERDATGLRPHAGFRPVVIDGSNVAMSHGDKKMFSCQGLQLAVN
WFWDKGLRDITVFVPLWRKEQPRPEAPITDQHILHELERRKILVYTPSRFVNGKRVVCYD
DRYIIRLAVDLDGIIVSNDNYRDLQMENSQWKRFIEERLLMYTFANDKFMPPDDPLGRNG
PTIDDFLRKKPWTPDSRQQHCPYGKKCTYGLKCKFYHPERVNQSQLSVADELRALGDRAK
NLSPAACPQEHRYTSSTPPPPSREDPSHRAVPTDRFTCQKAQTNTSNHYYPSSDRDEAFS
SMESSMSQLYIQDVPYSMEPPLTSHSSGLGSYLVSGSHGGNSLRACQSGPAYYSHQSGSC
ECKCGHQKSRAPANHHHPAWSSCPAVPPYTRDQASHFTEKQHFRPPADRHSLSLDPWVQG
SLPGTNLGCQNKSLSYDQRKNLRSQLSTLYPQSMVEQVLNENPDTTDMLELIQLLQSYRT
SNIF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcacatcaaagtggagcggtttcttaaactgggatactctcacagtgac
atcgtgagggtgctggagagcctccgccacgacgcccagactaatgacatcctggaggag
ctgataaaaacctgccacactcgcacccacagcgactccagcagccccagcagcccccag
ctagtgccccgaggctgcagccctggccccaacagatccagagccggaccggagcgagac
gccacaggtctgaggccacatgccggcttcagacctgtggtgatagatggaagcaacgtg
gccatgagccatggcgacaagaagatgttttcgtgtcagggcctccagctggcggtgaac
tggttctgggacaaaggactgcgtgacatcacggtgtttgttcccctgtggaggaaggag
cagccgcggcctgaagcaccaatcacagatcaacatattctacatgaactggagagaagg
aaaatcctggtgtacacaccctcccgctttgtcaacgggaaacgggttgtgtgttatgac
gaccggtacatcattaggctggcagtcgatttggacggtattattgtttccaacgacaac
taccgcgatctgcagatggagaattctcagtggaagaggtttatcgaggagagactcctc
atgtacacgtttgccaatgacaagttcatgcctccagatgatcctcttggtagaaatggc
cccactattgatgactttctgaggaaaaagccatggaccccagacagcagacagcagcac
tgtccatacggaaagaaatgcacctatggcttaaagtgcaagttctaccatccggagagg
gtcaaccagtcacagctgtcggtagctgatgaactgagggctctcggagacagagccaaa
aacctgtcacctgctgcatgtcctcaggagcacagatacacgtcgtccacccccccacct
cccagcagagaggatccgtctcacagagccgtacccactgatcgtttcacatgtcagaaa
gcccaaaccaacacaagtaaccattactacccaagctcggacagagacgaggccttcagc
tccatggagagctccatgtctcagctctacatacaagatgtaccctacagcatggagccc
cccctgaccagccacagcagcgggctgggtagctacctggtgtctggatcacatggtggg
aacagcctgagagcctgtcagagtggaccagcttattactcccatcagagcgggtcctgt
gagtgcaagtgtggtcaccagaagagccgggcccctgctaaccaccaccaccctgcatgg
agctcctgccccgctgtgcctccatataccagggaccaagcaagtcatttcacagagaag
cagcacttcagaccgcctgctgacagacacagcttgtccctggacccgtgggttcagggc
agccttcctggcaccaacctggggtgccagaacaagagcctgtcgtacgaccaaagaaaa
aatctaaggagccagctgagcaccctgtacccacagagcatggtggagcaagtcctgaat
gaaaacccagacaccacagacatgctggaactgatccagctccttcagagctacagaacc
agcaacatcttctaa
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