Nematolebias whitei (Rio pearlfish): 119418444
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Entry
119418444 CDS
T08042
Symbol
psmc1b
Name
(RefSeq) proteasome 26S subunit, ATPase 1b
KO
K03062
26S proteasome regulatory subunit T2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119418444 (psmc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nwh03051
]
119418444 (psmc1b)
Proteasome [BR:
nwh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119418444 (psmc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
RNA_helicase
AAA_3
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
Parvo_NS1
NB-ARC
ABC_tran
PhoH
NACHT
AAA_24
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
119418444
NCBI-ProteinID:
XP_037541655
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All DBs
Position
12:complement(20427339..20448036)
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcaaagtggaggccacggaccaggaggaggcaagaaggatgacaaggat
aagaaaaagaaatatgagcctccaattcccaccagagtgggcaagaaaaagaagaagact
aaaggaccagatgctgctagcaaacttccactggtcacacctcacactcagtgccgcctg
aagctgctgaagcaggagcggatcaaagactatttactgatggaggaggagttcatcagg
aaccaggagcaaatgaaacctttagaagaaaaacaggaggaggaaaggtcaaaggttgat
gacctgcggggaacccccatgtctgttggcactcttgaagaaatcattgatgacaaccac
gccatcgtttccacctcggtggggtcagagcattacgtcagcatcctgtcgtttgttgac
aaagatttactggagcctggctgttctgtgctgctcaaccataaggttcatgctgtgatc
ggtgtactgatggatgacacggatcccttggtgactgtgatgaaagtggaaaaggcgcct
caggaaacgtacgccgacatcggaggactggacaaccagatccaggagatcaaggagtcc
gtggagctgcctctcactcacccagaatattatgaagaaatgggcatcaagcctccaaaa
ggcgtcatcctctatggaccacctggcacaggtaagacgctgctcgctaaggccgtggcc
aatcagacgtcggcgacgttcctgcgcgtggtgggctccgagctgatccagaagtacctc
ggtgacggacccaagctggtgcgggagctcttcagggtggcggaggagcacgccccctcc
atcgtcttcatagacgagatcgacgccatcggcaccaaaaggtacgactcgaactccgga
ggggagagggagatccagagaaccatgttggagctgctcaaccagctggacggcttcgac
tcccggggagacgtgaaagtgatcatggccaccaaccggatagaaaccctggacccggct
ctcatcagacccgggagaatcgaccgcaagatcgagtttcctctgccggatgagaagacc
aaaagaaggatcttccagatccacaccagccgcatgactgtggcggacgacgtcaccctc
gatgacctcatcatggcaaaagatgacttatctggagcagacatcaaggccatctgcaca
gaagcaggcctcatggcgctgcgagagcgccgcatgaaagtcaccaacgaagacttcaag
aagtccaaggagaacgtcctgtacaagaagcaggagggcacaccggaggggctgtacctc
tga
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