Nematolebias whitei (Rio pearlfish): 119418450
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Entry
119418450 CDS
T08042
Name
(RefSeq) neurexin-3b
KO
K07377
neurexin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119418450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119418450
Membrane trafficking [BR:
nwh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
119418450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
119418450
NCBI-ProteinID:
XP_037541664
LinkDB
All DBs
Position
12:complement(21192095..21720847)
Genome browser
AA seq
1697 aa
AA seq
DB search
MHPHGLAGYFLMLLSTMLGLSVGLEFTGSQGQWARYLRWDASSKSDLTFQFKTSESEGLV
LYFDDGGYCDFLLLTVSEGRLQLRVSIDCAETTIASDKTVNDSRWHFAAINRQNLWTGLA
VDGQTKTGEVRPQRQFMKIVSDLFLGGLPGDIRTSAITLPSVRELPPFKGIITNLIYGSK
LPTLINSQKVRLEMMGLCTENPCENGGICSLADGETYCDCSKTGFVGRYCTEAVQRKPEL
AHLKAEQGRSKVREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLRQVTISVDGI
LTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDIRLELSR
LARIVDPKMKLQGDVVFKCENVPTLDPINFETPDSYLALPKWNTKRVGSISFDFRTSEPN
GLILFTHGKPQGRRDLKNQKNNKVDFFAVELLDGGLYLLLDMGSGTVKVKATQAKVSDGA
WHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGLPDSRVALVLPTELWTA
MLDYGYVGCVRDLFIDGRSKDIRQIAQSQNVTGIKSSCSKAVGKQCDSSPCKNSGVCKEG
WNRFICDCTGTGFWDSTCEREASILSYDGSMYMKVVMPNIMHTEAEDVSLRFMSQRAFGL
LMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLYAGQKLNNNEWHSVRV
VRRGKNFKLIVDDDMAEGQMAGDHTRLEFSNMETGILTEKRFVSSTPSPFIGHLQSLKFN
GMQYIDMCKNGDIDFCELNARFGMRFIVADPVTFKTKGSYLGLATLQAYTTMHLFFQFKT
TSPDGFIIFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLLKGNSDNPLNDNQWHNVVITR
DAANTHTLKVDSKSVTQNVNGAKNLDLKGDLFIGGLGPNMYQNLPKLVVSREGFQGCLAS
VDLNGRLPDLINNALFRSGQIERGCEGPSTTCQEDSCSNMGVCIQQWENFTCDCSMTSYS
GTHCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGFSTTIKDGILVRIDSAPRLG
DYIMLHIEQGKAGVTFNIGTVDISVKENSTPVNDGKYHLVRFTRNGGNATLQVDNWPVNE
HFPSGNSDIERYQMANKKIPFKYTRPVEDWIQEKGRQLTIFNTQATISIGGNDRKRPYQG
QLSGLYYNGLKVLNMAAEGHPNIKVNGSVRLVGDVPTSRGATRTTTSVPPEMSTTFIETT
TTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDLEECDSGHTGGELVIPILVEDPIDI
PSVSTRSPFIPLPPTLRPVLTIIDTTKESLAMATEAGVPCFSDRGSDDCDGGDGGDDDGD
GGDDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKTLTTSAYEGGYKVLVP
KWEAKDLRPSKASEAGRTIPTLPLPDIGGTPPAAVPSDTPPKLPAGKMDNREVKPLQPDI
VLLPLPTSFDVDGTKPRDPFITSPMLRTVPAALPTIPDVVRHMPPGVSEVIRESSSTTGM
VVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGAVVKDKTPSGSAK
GSSSSKRPKDKDKEYYV
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgcatccacacggcctggctggatattttctcatgctgctaagtaccatgctggggcta
agtgtaggcttggagtttactggctcacaaggtcaatgggctcgatatctgagatgggac
gccagctctaaaagtgatctaacgtttcagttcaagacctcagaatcggaaggcctggtg
ctctactttgacgatggtggttactgcgactttctgctcctcactgtgtctgagggtagg
ttgcagcttcgtgtcagtattgactgcgctgagaccaccattgcctctgataaaaccgta
aatgacagccgctggcactttgctgccatcaacaggcaaaatttgtggacgggcttagcc
gtggatggccagaccaagacgggagaagtgcggccccagcggcagttcatgaagatcgtt
agtgacctctttctgggagggcttccaggggatatacgcacgtcggccatcaccctgccc
tctgtccgcgagcttccgccattcaaaggaattatcaccaacctcatttatgggagtaag
ttgcccacgttaatcaacagccagaaagtacgactggagatgatgggcctctgcactgag
aacccctgtgaaaacggtgggatctgctcactggcagatggagaaacctactgtgactgc
tccaaaactggatttgtaggtcgatactgcactgaagcagtccagagaaaaccagaactc
gcacacctgaaggcagaacaaggtagaagcaaagtgcgggaggagaacgtggccaccttc
cgtggttcggagtacttctgctacgacctgtcacagaaccccattcagagcagcagcgac
gagatcacgctgtccttcaagacctggcaacgcaacggcctcctcctgcacacggggaaa
tccgcagactatgtcaacctggcgctgaaagacggggccgtttccctcgtcatcaatctg
ggctctggggcctttgaggccatcgtggagccagtcaatggaaaattcaatgacaatgcc
tggcacgacatcaaagtgacacgcaacctgagacaggtgacaatctctgtcgatgggatc
ctcaccaccaccggctacactcaggaggactacaccatgttgggctccgatgatttcttc
tatgtgggtgggagccccagcactgcggacctgccaggatctccagttagcaacaatttc
atgggctgcctcagagaggtggtgtataaaaacaacgatatccggttggagctgtcgcgc
ctggcccgcatcgttgaccccaagatgaagctccaaggcgatgtggttttcaagtgtgaa
aacgttcccactctcgacccgataaactttgagacccctgactcctacctggccctgccg
aagtggaataccaaacgcgtgggctccatctcctttgacttccgcacctcggaacccaac
gggctgatcctcttcacccacgggaagcctcagggtcgacgggacttgaaaaaccagaag
aacaacaaggtggacttctttgctgtggagctgctggatggtgggctgtacctgcttcta
gacatgggctctgggacggtcaaagtcaaggccacccaggctaaagtcagcgatggtgct
tggcaccacgtggatatccagagggatggtcgctctggcatcatttcagtaaacagccgc
aggacacctttcaccgccagcggggaaaatgagatcttggacctggaaggagacctttat
ttgggcggtctgcccgatagccgggtggctttggtgctccccaccgagctatggaccgcg
atgttggactacggctacgtgggctgcgttcgggatctgtttattgacgggcgcagcaag
gacatcaggcagatagctcagtctcagaatgtgaccggcatcaagtcgtcgtgcagcaag
gcggtggggaagcagtgtgacagcagcccctgtaagaacagcggggtgtgcaaggagggt
tggaaccgcttcatctgcgactgcactgggaccggcttctgggacagcacctgcgagaga
gaggcatcgattctgtcttacgacggcagcatgtacatgaaggtggtgatgccgaacatc
atgcacaccgaagccgaggacgtctcccttcgcttcatgtctcagagggccttcggtttg
ctcatggccgccacgtcccgtgagtccgccgataccctgcggcttgagctggacagcggg
agggtcaaactgacggtcaatctagactgtgtcaggataaactgtaacaccagcaaaggt
cctgaagttctttatgctggacaaaagctcaacaacaacgagtggcactcggtgcgagtg
gtccgccgcggtaaaaacttcaaacttatcgtggatgacgacatggctgaaggtcagatg
gcaggtgaccatacccgcctggagtttagcaacatggaaacaggcatcttgaccgagaaa
cgcttcgtttcttcaacaccctcgccctttatcggtcaccttcagagcctcaagtttaac
ggtatgcaatacatcgacatgtgcaagaatggggacatcgacttctgtgaactcaacgca
cgctttggcatgcgattcattgtcgccgaccccgtcaccttcaagactaagggcagctac
cttggactggccactctgcaggcttataccacaatgcacctgttctttcagttcaaaacc
acctctcctgatggtttcatcatcttcaacagtggagatgggaatgacttcatcgcagtg
gagctggtcaaagggtttgtccactacgtgtttgacctcgggaatggacccagtctgttg
aaagggaatagcgacaacccactgaatgataaccagtggcacaatgtggtcatcacacga
gacgctgcaaacacacacaccctcaaggtggactccaagtcagtcactcagaatgtcaat
ggagccaaaaaccttgaccttaaaggtgacctgttcatcggtggtttgggacccaacatg
tatcagaacctccccaagctggtggtttctcgggagggcttccagggctgcttggcctct
gtggatctcaacggccgcctgccagacctcatcaacaacgccctttttcgcagcgggcag
atagagcgtggctgcgaaggcccgagtaccacctgccaggaggactcgtgctcgaacatg
ggcgtgtgcatccagcagtgggagaatttcacctgcgactgctccatgacatcatactca
gggacccactgcaacgaccctggtacaacctacatctttggaaaaggagggggactgatc
acatacacctggcccaacaatgagaggccaagcacacggactgaccgcctggcagtgggt
tttagcaccaccatcaaagacggcatcctcgtccgcatcgacagcgccccacgcttggga
gactacatcatgctacacattgaacaaggcaaagctggcgtgacgtttaacattgggacg
gtggacatcagcgttaaggaaaatagcacaccggtaaatgatggtaaataccacttggtc
cgattcaccaggaacggaggcaatgcaaccttacaggtggacaactggccggtgaatgag
cactttccctcaggcaacagcgacattgagcgctatcaaatggcaaataagaaaatccct
ttcaaatatacccggccagtagaagattggattcaggagaaaggccggcagctgacaatc
ttcaacactcaggccactatctctatcggcggcaatgaccggaagcgaccctaccagggt
cagctctctggcctttattacaatgggctcaaggttctcaacatggccgcagagggccac
cccaacatcaaggtgaatggcagcgtgcgactggtgggcgacgtgcccacgagccggggt
gcgacacgcaccaccacctcggtaccaccagagatgtccaccactttcatcgagacgacc
accaccctgtctactacaaccacccgaaaacagcgctctccacctaccattcagaccacc
gacgacatcgtttcgtccgccgagtgctccagcgacgacgaggacctggaggagtgcgac
tccggacacacaggaggggagctagtcattcccattctagtcgaggaccccatagacatc
ccttctgtatccacccgttcacccttcattcccctccccccaaccctccgccccgtcctc
accattatcgacaccaccaaagagtccttggccatggccactgaggcgggggtaccttgc
ttttcggaccgaggcagcgatgattgtgatggtggtgatggtggtgatgatgatggtgat
ggtggtgatgatgatgatgatgatgatggcatggtgatttcggggtttggctctggtgaa
gctttcgactctagcctgcccccgactgacgatgaagatttttacaccaccttctccctg
gtaacagataagaccttgaccacatcggcctatgaaggtggctacaaagttctcgtgccc
aagtgggaagccaaggacttgaggcctagcaaagcctcagaggcaggtaggactataccc
accttgcctctgcctgacatcgggggcacaccgccggcagcggtcccctcggatacgcca
cctaaactgcctgcagggaaaatggacaatcgtgaggtaaaacccctgcagccagatatc
gtcctgctgcccctgcccacgtcctttgatgtggacggcaccaagccaagagaccctttc
atcacctcgcctatgctgcgcactgtacctgctgccttgcccacgatacctgatgtggtg
aggcacatgcctccgggggtctcggaggtgatccgggaatccagcagtactacgggcatg
gtggtgggcattgtctcagctgcagctctctgcatcctcattctcctctatgccatgtac
aagtacaggaacagggatgagggatcctaccaggtggatgaaacacgtaactacatcagc
aactcggcgcaaaccaacggcgctgtggtgaaggataaaacacccagcggtagcgccaaa
ggtagttccagtagcaagagaccgaaagacaaggacaaggaatactatgtatag
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integrated database retrieval system