Nematolebias whitei (Rio pearlfish): 119418471
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Entry
119418471 CDS
T08042
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
119418471 (gpcpd1)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
119418471 (gpcpd1)
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Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
KGK
TreTu_C
Motif
Other DBs
NCBI-GeneID:
119418471
NCBI-ProteinID:
XP_037541686
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Position
12:complement(24759028..24776152)
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AA seq
678 aa
AA seq
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MPVSAMETTQVTLVIREETSPGEVIAVVGSCEALGNWSYQKAVTLHPLGDDGQAWTVTVS
VPRGVVSRYRYFKGFFLESKSAGGPCQVIVNMWETHLQPRTMSPTETHQNIDDGQFGFQN
DLKCLDSGWLTCQTDIRLRLHYSKRPPVSITKKKYKKSRFRIKLTLEGVEEEEEDEEDEL
SSSSRHKMTTTLGISMMDINGYKSRHSQPECGYALEPPRWTEYSILTMDPDNLELTFEFF
EEDLSEHVVQGDIHPGHVGTACLLSSSFSEHGKDTGVVTLPIMGRNSRQTIGKVRVDYMV
IRPIQGLECDMSSSYTKHWKKRSTVDVGHRGAGSTHAAKHYKVRENTITSFKSAAKHGAA
FVEFDVHLSKDAVPIVYHDLTCCISTKKKNDKNLELIEVPVKDLTFDQLQLLKLAHTTAM
QGSDYKDLLDDEDEIDEHQPFPSLSQIFQAIPEHVGFNIELKWISQMKDGSWDGNLSSYF
NMNTFLDIIFSCVLQKGGKRRIIFSCFDPDICTMVRHKQNKYPILFLTQGVSVKYPELMD
IRCQTTQFAVSYAQSENILGISAHTEELLKHLNYIREAQSTGLVVFSWGDDNNDHETRKK
LREEGIDGLIYDRICEAQGEQANIFQVEEQHTLQEVITEETLKSSACACYTIPCSMVPCV
ASKAHGGSAESDSGLSSS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtcagccatggagaccacccaggtgactttggtgatcagggaggaaacatct
ccaggtgaggtgattgcagttgttggtagctgtgaggccctgggaaactggagctatcaa
aaagctgtgactttacatcctctaggtgatgatgggcaggcttggactgtaacagtctct
gtgcccagaggtgttgtttccaggtatcgctattttaaaggcttcttcttagagtctaag
agtgcaggtggcccctgtcaagtgatagtcaatatgtgggagacccatcttcagccccgc
acgatgagccccacagaaacgcatcagaatatcgacgatggacagtttggatttcaaaat
gatttaaaatgtcttgactcggggtggctgacatgccagacggatattcgcctgcgattg
cactattccaagaggcctccagtgtccatcactaagaagaaatataagaagtctcgcttc
aggatcaagcttacattggagggtgttgaggaagaggaagaggatgaggaagatgagctc
agctcttcatctaggcacaagatgaccaccactctggggatcagtatgatggatattaat
ggctataagtctcgacactctcagccggagtgtggttacgccctggagcccccccggtgg
acagagtacagcatcctcaccatggaccctgacaacctggagctcacctttgagtttttt
gaggaggatctgagtgagcatgtggttcagggggacatccacccggggcacgtggggaca
gcctgcctcctctcctcttcattttcagagcatggcaaagacacgggggtggtcacactt
cccataatgggaagaaactccaggcagaccattgggaaagtgagagtggattacatggtg
atccggccaatccagggcctcgagtgtgacatgagctcgtcgtacacgaagcactggaag
aaaagaagcactgtggatgtcggtcacagaggagcgggcagcacgcacgctgccaaacac
tacaaagttcgagagaacacaatcacctcttttaaaagtgcagctaaacatggtgcagcc
tttgtggagtttgatgtgcacctctctaaggatgctgtgccaattgtataccatgatctg
acctgctgcatttccaccaagaagaaaaatgacaaaaatctggagctcatcgaggtcccg
gttaaagatctgacatttgatcagctgcagcttcttaagttggcccataccactgcaatg
caaggaagtgattacaaagatcttctggatgatgaagatgaaattgatgaacatcagcca
ttcccctcgctgtctcagattttccaagctattcctgagcacgttggcttcaacatcgag
ctcaaatggatcagccagatgaaggacggatcatgggacggaaacctgtcctcctatttc
aacatgaacaccttcctcgacatcattttctcctgcgttctgcagaaaggtgggaagaga
cgcatcatcttctcatgtttcgacccagatatctgcacaatggtgcgacacaagcagaac
aagtatcccatcctgttcttgactcagggggtttctgttaaataccctgagctgatggac
atccgctgccagaccactcagtttgctgttagctacgctcagagtgaaaatattctgggc
atcagtgcccacactgaggagctgctgaagcacctgaattacatcagggaggcccagtcc
acaggcctggtggtgttcagctggggcgacgacaataatgaccacgaaaccaggaagaag
ctgagggaggaaggaattgatgggctcatatatgatcggatttgtgaagctcaaggagag
caagcaaacatcttccaggtagaagagcaacacactctgcaggaggtcatcacagaggag
accttaaagagctctgcttgcgcctgctacaccattccctgctccatggtaccatgtgtt
gcctcaaaggctcacggtggaagtgccgagtctgattctggcctcagctcttcataa
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