Nematolebias whitei (Rio pearlfish): 119418575
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Entry
119418575 CDS
T08042
Symbol
capn3b
Name
(RefSeq) calpain-3b
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119418575 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119418575 (capn3b)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119418575 (capn3b)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C2: calpain family
119418575 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Noelin-1
Mad3_BUB1_II
Motif
Other DBs
NCBI-GeneID:
119418575
NCBI-ProteinID:
XP_037541823
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All DBs
Position
12:complement(38122849..38141766)
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AA seq
765 aa
AA seq
DB search
MEDEKSPGRVPLVEETKVKLLYDTEASLEHDGNVDYGVTGSNSIYSAILSRNEAVKDATR
LKTFLELRDKYVKKNVVFEDPLFPANDSSLFYSQKPLMKFEWKRPSEICENPQFIVDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVV
VDDRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
YFELPEAPADLYSIMKKALQRGSLMGSSIDVSSASELESRTEHGLVRGHAYSIIALEECD
EVAKDTKIRLIRLRNPWGWVLWKGPWCANSKEWSTISTADRENLKKQTVETSEFWMSFDD
FKKIFTKLEMCNLTPDTLQEDERHSWTVSVHEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LYEEDDDPEDGQVVCTVVVALMQKGRRMQRHKGLKFLTIGFSIYEVPKESEGQDQHLQKD
FFLYTASKAKCKSYINLREVTERFRLPPGTYVIVPTTYNPHDEGEFILRVFSEKQNTSEE
AETTIDQTQQDKKMKSKPIVFVSDRARANKEIEHDGIQGEKKKRPKLLQPEETEEEKNFR
VIYKQIAGEDMEICANELKTIMNNVLSKHKNIKTEGFSLETCRSMIALMDTDGSGKLHFQ
EFKHLWKKIKEWQLIFKHFDKDKSSISSFEMRNAVNAAGFHLNKQLYDIIAMRYADERLN
IDFDSFICCFVRLEGMFRAFNAFDKDGDGLIKLNVLEWLQLTMYS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagaaaagcccagggagagttcctctggttgaggaaaccaaggtgaagctg
ctttacgacaccgaggcgtcactggagcacgatggcaacgtcgactacggcgttacgggg
tcaaactccatctactctgccatcctgagcagaaatgaggccgtcaaagatgcgacgcgt
ctgaagaccttcttggagctgcgagacaagtacgtgaagaagaacgttgtgttcgaagac
cccctgttccctgcaaacgactcctcgcttttttatagtcagaagcctttgatgaagttt
gagtggaaacgtccctcggaaatctgtgaaaaccctcagtttattgtggacggagccaac
agaacagacatctgtcaaggagagctgggtgactgctggctgctcgctgccatcgcctgt
ctgactctgaacgagaagctgctgtacagagtgattcctccggatcagagcttcactgaa
aattacgccgggatcttccacttccagttttggcgttatggcgagtggatcgatgtggtg
gtggatgatcgcatccccacctgcaacaaccagctggttttcaccaaatccttcaggaag
aacgagttctggagcgctctgctggagaaagcctatgcaaagttgcacggctcgtacgaa
gcactaaaaggggggaatactctggaggccatggaggactttaccggcggagttactgag
tattttgagttgcctgaggcgccggcggacctctacagcatcatgaagaaggccctgcag
agaggctcgctgatgggcagctccatagatgtttcttcagccagcgaactggagtctcgg
actgagcatgggctggttagaggtcacgcctactccatcatcgctctggaggagtgtgac
gaagttgcaaaggacaccaaaattcgcctgattcgattgcgcaacccctggggttgggtg
ctctggaagggaccctggtgtgccaactcgaaggagtggtcgaccatctccactgcagac
agggagaatctgaagaaacagaccgtagagacgagtgagttctggatgtccttcgatgat
ttcaagaagatcttcactaagctggagatgtgcaacctgacgcctgacacgctgcaggaa
gacgagaggcacagctggacggtgtcggtccacgagggtcgctgggtgagaggcagctct
gccggcggctgcaggaactttccagacacgttttggacgaatcctcagtatcggcttcag
ctgtacgaggaggatgacgaccctgaggacgggcaggtggtctgcactgtcgtcgtggct
ctgatgcagaaaggacggaggatgcagcgccataaaggcctcaagttcctcactattgga
ttttccatctatgaggtgccaaaagagtcagaagggcaggatcaacatctgcagaaagac
tttttcctctacacggcctccaaagccaaatgcaagtcctacatcaacctgcgggaggtg
acggagcgtttccgacttccccctggcacgtatgtcatcgtccccaccacctacaatccc
catgatgagggagagttcatcctcagggtcttctctgagaagcagaacacatctgaagag
gcagagaccaccatcgaccaaacgcagcaagacaagaaaatgaagagcaagcccattgtg
tttgtgtcggacagagcgcgggccaacaaagaaatcgagcacgacggcattcagggggag
aagaagaaaagacccaagctgctacaacctgaggagaccgaagaggaaaaaaacttcagg
gttatttacaaacagattgccggtgaggacatggagatctgtgcgaatgagctgaagacc
atcatgaacaacgtcctttccaaacataaaaacataaagaccgaagggttcagcctggag
acgtgtcggagtatgatcgccttgatggacacagatggatccgggaagctgcacttccag
gagttcaaacatttgtggaaaaagatcaaagagtggcagctcatcttcaaacacttcgac
aaagacaagtcgtccatcagcagcttcgagatgaggaacgcggtcaatgctgcagggttt
cacctgaacaagcagctgtacgacatcatagccatgcgctacgcagacgaacgcctcaac
atcgatttcgacagtttcatctgctgcttcgtcagactcgagggcatgttcagagctttt
aatgctttcgataaagatggagacggattaattaaactcaatgtcctggagtggcttcag
ctgaccatgtactcgtag
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