Nematolebias whitei (Rio pearlfish): 119418631
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Entry
119418631 CDS
T08042
Symbol
afdna
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04517
IgSF CAM signaling
nwh04520
Adherens junction
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119418631 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119418631 (afdna)
04530 Tight junction
119418631 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
119418631
NCBI-ProteinID:
XP_037541882
LinkDB
All DBs
Position
12:44973266..45092192
Genome browser
AA seq
1939 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKDKKKEKKREKEFARIPDG
DEQTLGREDGENSCLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PESGGTLRIYADSLKPNIPYKTILLSTRNTADFAVVEALEKYGLEKENPREYCIARQDEK
SGKDVILDDSECPLQIFRDWPADRGSMVFQLKKRPPDYQGRKGRKVDDKGLRGKDGLLPP
EKLPYLVELSPDGSDSRDKPKLYRLQHSITEVGSDCTDDGAIQLLGPGVLPHHCNLMHSE
GMVTVTPHGPDADTFVDGQRVTETTVLRSGSTLQFGSAHVFKFVDPMYDQGGGREPAALM
RSRHKSGSVPETTFDLHGDVHSGAALPTSKSSGKLEMERGMVKPMIRGEQQDSRSQDVSA
DRTELTLPASIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSPAYRPDM
SPSERTHKVIAIVNKMVNMMEGVIQEIPEGDQKQKNIAGALAFWMANASELLNFIKQDRD
LSRVTLDAQDILAHLVQMAFKYLVHCLQADLKNYMPAFLDDPEEHNPQRPKIEDVLHTLT
GAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDTESGLCCHYWGAILRQQLSHIE
AWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFKLNSLQLHALMTNYHC
APDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRN
LPNGLQDFLEPLLQRGFCRLVPHPRSPGTWTVHFEGADNDSHFTAADNTEMPMRKEPEVV
TVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADMDGRLAAGDQLLSVDGRSLVG
LSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPLMQRAADRGRDKNGKMRPKS
EGFELYNNTAQNGSPDSPQPGWDSYPEPKKMSGEERLLKNRADHRSSPNVANQGQSPASK
SVYPGGPGTKITSVSTGNLCPDDEPSPPHPEAYPIPTQTYSREYFTTPASKGQDRVMGPG
QPPSQHWQVMEDRERLPVVENIHNSMQRINHSQEELYPPPVRPDERMQPHYPQEYQHRDL
DYQHRGPPGGVGGPQDLWTPQPVSSSLESSTSSQEHLNFSNSSTSSNKGQNQRTGAGRWK
TPNTPHVVPPHSVQAPSRSDLPPPPPPPPAAYPDAYDPQTDLPLPPPPTAISPATAQQAA
DRKKREEQQRWYEKEKARLEEERERKRREQERKLGQIRANPVMPVQPHNNGGAMPPPHHQ
PPMASMAPPQPYLPPQPQPPPSRPEKLSSLPRSAVPPTACASNPAGMDTVIRELLPQQQP
RTIERRDLQYITINKEGLSASDSLSPDPWKRDAREKAEKQQQLHIVDLLDKEIQELQSKP
ERTAEESDRLRKLMLEWQFQKRLQESKQSDEDEEEEDDEDMDHMLIMQRLEAEKRARQQT
AVPAISVLDLLQDEERRRKQQLEEIRKREAEERAKQLQQEEERRWREEERAKREAEEKRR
QEEEYYTRLEAERRRRQQHEDAERKLLTPDEPTGLYRPPLPRDYQPPAPSNPTNTPPPPP
QRNTSYLKTQVISPDTLYTAMLVSYAGDEEDDEEANTAGSGGGQSGQAKLSATRKSYGDL
PGSASHGHNRPQPPPTARKPRPLSDGIFLSGSYQPPANNSNSTGPPLPAKPSSVPPGGHK
GFNSYTGNSTGVVGSDVYKDPRDKWTKSQEQENSVPGDAPESLTFKERQRLFSQGKEVSN
KVKASRKLMELENELNTKQ
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gctaaccggctcgacctgttcgagatcagccagcccacggaggacctcgagttccatggc
gtgatgcggttctacttccaggaccgggtggccggtaactttgccacaaagtgcatcagg
gtctccagcacagcgacgacgcaggatgtcattgagacgttggctgagaagttcagacca
gatatgaggatgctgtcctctccgaagtactccctgtacgaggtccacgtcagcggcgaa
gagcgtcagctggacctggacgagaagcctcttgttgttcagctgaactggaacaaagac
gacagagagggacgcttcgtcctgaagaacgagaacgacatcctgcccaagaagagccag
agtaacgggccggagaaggagaaagatggagtgatacagaacttcaagaggactttgtct
aaaaaggacaagaagaaggagaagaagagggagaaggagttcgctcggatccccgatgga
gatgaacagactttgggccgtgaagacggggaaaacagttgtctggcggccgaggtttat
aaggacatgcctgagaccagctttaccagaacaatttccaacccggaggtggtgatgaag
aggagacggcagcagaaactggagaaacgcatgcaggagttcatgagcagcgacgggagg
ccagaatcgggcggtactttaagaatctatgccgacagtttgaaacccaacatcccgtac
aaaaccatcctgctctccacgaggaacacggctgacttcgctgtggtcgaggcgctggag
aagtacgggctggagaaggagaaccccagagagtactgcatcgctcggcaagatgaaaaa
tcgggcaaagatgtgattctggatgattccgagtgtccgctgcagatcttcagagactgg
cctgcagacagaggatcgatggtgttccagctgaagaagagaccacctgactaccagggg
aggaaaggaaggaaggtggacgacaaagggctcagagggaaggacggcttgctgcctcct
gagaagttgccttatctggtggagcttagtcctgacgggtccgactcgcgggacaaacca
aagctgtaccgtcttcagcacagcataaccgaggtcggttcggactgcaccgacgacgga
gccatccagctgctcggcccgggggtcctgccccaccactgcaacctgatgcacagcgaa
ggaatggtgaccgtgacgccgcacggccccgacgccgacacctttgttgacggacagcgc
gtcaccgagacaacggtgctgcgctcgggctccaccctccagttcggttctgcgcacgtc
tttaagtttgtggaccccatgtacgaccagggaggggggagagaaccagccgccctgatg
agaagccgacacaagtctggcagcgtaccagaaaccaccttcgaccttcacggagacgtc
cacagtggagcggccctgcctaccagcaagagttcagggaagctggagatggaaagagga
atggtgaaacccatgatccgaggggagcagcaggacagcaggtctcaggacgtttcagcg
gaccggacggagctcactcttccagccagcatcgagttcagagacaactctgaagacacc
ttcctgtcggccatcatcaactacaccaacagctccacggtccacttcaaactctcgccc
acttacgtcctgtacatggcctgccgctacgtcctgtcgcccgcgtaccggcccgacatg
tctccatcggagaggacgcacaaagtcatcgccatcgtgaacaagatggtgaacatgatg
gaaggagtcatccaggagattcctgaaggggatcagaagcagaagaacatcgccggagcg
ctggctttctggatggccaacgcctcggagctgctcaacttcatcaagcaggaccgagac
ctgagtcgcgtcacgctggacgcccaggacatcctcgcccacctcgtccagatggccttc
aagtacctggtccactgtctacaagcggatctgaaaaactacatgccggccttcctggat
gacccagaggagcacaatccacagagacccaagatcgaggacgtcctgcacacgctgacg
ggcgccatgtcattactgcgccgctgcagagtcaacgccgccctcaccatccagctcttc
tcgcagctcttccattttatcaacatgtggctgttcaacaagctggtgacggacacggag
tcggggctctgctgccactactggggggccatactccgacagcagctcagccacatcgag
gcctgggctgaaaagcagggcctggagctcgccgccgactgccacctcagtcgtatcgtg
caggccaccaccctgctgaccatggacaagtactccatgcaggatgtacagaacatccac
aacacctgcttcaagttgaactccctgcagctccacgccctcatgaccaactatcactgt
gccccggacgagccctacatcccacctgagctgatcgaccacgtggtggcagtggcagag
aacaccgcagacgagctggcaaggagcgacggcagagaggtgcagctggaggaggacccg
gacctccagctgcccttcctcctccctgaggacggctactcctgtgacgtggtgcgaaac
ctccccaacggtctgcaggacttcctggagccgctgctgcagagaggtttttgtaggttg
gtaccacatccgcgctcgccgggtacctggaccgtccactttgaaggagctgacaacgac
agccactttacggctgccgacaacaccgaaatgccaatgaggaaagagccggaggttgtc
acggtaaccctgaagaagcacaatggcatgggcctcagcatcgtggctgccaagggtgct
ggtcaggagaagctgggcatctacatcaaatctgttgtcaaaggtggagcagctgatatg
gacggtcgtttggcagcaggcgaccagctgttgagtgtcgacggtcgcagtctggtcggg
ttatcccaggagagggctgcagagctgatgacgaggacgggctcagtcgtgacgctggag
gtcgccaagcagggagccatttaccacggactggcaacgctcctcaaccagccgagcccc
ttgatgcagagagcggcggaccgaggtcgagataagaacgggaagatgcgaccgaagagc
gaaggcttcgagctgtacaacaacacggcgcagaacggttctcccgacagcccgcagccc
ggctgggactcttaccccgagccgaagaagatgagcggtgaagagcggcttctgaagaac
cgggccgaccaccgctccagccccaatgtggccaatcagggccagagtcctgcgagtaag
tccgtgtaccccggaggacccggcacgaagatcacctccgtctctacgggcaacctttgt
cctgacgatgaaccgtctcctcctcatccagaggcctaccccatccccacccagacctac
tccagggagtacttcaccaccccggcctccaagggccaggatcgggtcatgggtccagga
cagccaccctcacaacactggcaggtcatggaggaccgagaacgcctccctgtggtcgaa
aacatccacaacagcatgcagagaatcaatcactcccaggaggagctgtaccccccacct
gtgaggcctgatgagcgcatgcagcctcactacccgcaggaataccagcaccgggatctg
gactaccagcaccgaggtccaccaggaggtgtcggaggaccacaggacctctggaccccg
cagccggtgtcctcctcgttagagtcgtcgacatcaagtcaggagcacctcaatttctcc
aattcttccacttcttcaaataaaggccagaaccagaggaccggggcggggcggtggaag
actcccaacacccctcacgttgtgccgccgcattcggtgcaggcgccgtcccgctccgac
ctgccccctcctcctccgcctcctcccgctgcctaccccgacgcctacgatccgcagacc
gacctgccgctgccgccgcctcccaccgccatcagcccggcgacggcgcagcaagccgcc
gatcgcaagaaacgagaggagcagcagcgctggtatgagaaggagaaggcacggctcgaa
gaagagagggagagaaagaggagggaacaggagaggaagttgggtcagatccgggccaac
cccgtcatgcccgtccaacctcacaacaacggaggagccatgcctcctcctcatcaccag
cccccaatggcctccatggccccgccccagccttacctccccccgcagcctcagcctccc
ccttccagacccgaaaagctgtccagcctgccgcggtcagcggtgcctcccaccgcctgt
gcctccaaccctgcaggcatggacacggtgatcagggagctgctccctcagcagcagccg
cggaccatcgagaggcgagacctgcagtacatcaccatcaataaggaggggctgtcggcc
agcgacagtttgtctccggacccctggaagagagacgcccgagaaaaggcagagaaacag
cagcagcttcacatcgtcgacctgctggacaaagaaatccaggaacttcagtcaaaacca
gagcgaacggcagaagaaagcgaccgcctcaggaagctcatgttggagtggcagttccag
aaacgattgcaggagtccaaacagagcgacgaagacgaggaggaggaggacgatgaggac
atggaccacatgctgatcatgcagaggctggaggccgagaagagagccaggcagcagact
gctgtcccagctatctctgttctagacttgttgcaggatgaggagcggcggcgtaagcag
cagctggaggagattcgaaagagggaggcggaggagcgagcgaagcagctgcagcaagag
gaggagaggaggtggagggaggaggagagagccaaacgggaggcggaggagaagaggaga
caggaggaggagtactacacccgcctggaggcggagcggcggcggcggcagcagcacgag
gacgccgagaggaagctgctgacgcccgacgagccgactggtctgtatcggcccccgctg
cccagggactaccaacctcccgcccccagcaaccctactaacacccccccacccccacca
cagagaaacacctcctacctcaaaacacaggtcatctcccccgacacgctctacaccgcc
atgctggtgtcctacgcgggcgacgaggaagacgacgaggaagccaacacggcagggagc
ggcggcggtcagtcaggtcaggccaagctgtcggcgacccggaagtcgtacggcgacctc
ccgggctccgcctcgcacggtcacaacaggcctcagccgccgcccactgctcgcaagccc
cgcccgctttccgacggcatcttcctgtctggctcgtaccaaccgccggccaacaactcc
aacagtacaggccccccccttcctgccaaacccagctccgtccccccaggaggccataaa
ggatttaactcgtacactggaaactcgacaggagttgtaggatcagacgtctacaaggac
ccgagagacaaatggacgaagagtcaggagcaggagaactcggtccccggcgacgctccg
gagagtctcaccttcaaggagcgccagcgtctcttctctcaggggaaggaggtttccaac
aaggtcaaggcttcccgcaaactcatggagctggagaacgagctcaacaccaagcagtag
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