Nematolebias whitei (Rio pearlfish): 119418835
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Entry
119418835 CDS
T08042
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119418835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119418835
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119418835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
119418835
NCBI-ProteinID:
XP_037542057
LinkDB
All DBs
Position
13:14747313..14804730
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AA seq
254 aa
AA seq
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MSHSWEVNLTGVQQSKGVWLVKVPKFLSQQWNKTTAKGEVGKITIGKKQGKTEVCFSLNQ
ELVALGGDGEKDSGSLQVPKEYPFSMHAVGGQTMAVFSQSDAGEVSLEGTVVQRAECRPV
ASESYMKIKRLQIELVKPQRLSQQLDRAVTTVFKPVANHNFNVAFEKKKKSEGKMVRAER
QVVLDMLFSAFEKHQFYSFKDLVDITKQPVSYLKDIMREICVCSRKGAHKSTWELKPEYR
HYQPADEEEEPQNA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagctgggaggtgaatttaactggagtccagcagagtaaaggtgtctggctg
gttaaggttcccaagtttttatctcagcagtggaacaaaaccacagccaaaggagaagtt
gggaagattaccattgggaagaaacaaggtaaaaccgaggtttgtttcagcctgaatcag
gagctggtcgccctgggtggtgatggggagaaggactcaggatcgctgcaggtcccaaag
gagtatcccttcagcatgcacgcagtgggtggacagaccatggccgtcttcagccagagc
gacgcaggtgaagtcagcctggaggggacggtggtgcagagggctgagtgccgacctgtc
gcctctgagagctacatgaagattaaaaggctgcagattgaattggtgaagcctcagcgt
ttgtcgcagcagctggacagagctgtgaccaccgtctttaagcctgtggccaaccacaac
ttcaacgtggcgttcgagaagaagaagaagtccgaggggaagatggtgagagcggagcgg
caggtggtgctggacatgctcttctctgccttcgagaagcaccagttttacagcttcaag
gacctggtggacatcaccaaacaacctgtgtcctacctgaaagacatcatgagggagatc
tgtgtctgcagtcgtaaaggagctcacaaaagcacgtgggagctgaagccggagtaccgc
cactaccaacctgctgacgaagaggaggaaccgcagaacgcctag
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