Nematolebias whitei (Rio pearlfish): 119418891 Help Entry 119418891         CDS       T08042                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh04382   Cornified envelope formation nwh04510   Focal adhesion nwh04512   ECM-receptor interaction nwh04518   Integrin signaling nwh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nwh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     119418891 (col4a1)    04518 Integrin signaling     119418891 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     119418891 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     119418891 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     119418891 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:nwh04147]     119418891 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:nwh00536]     119418891 (col4a1) Exosome [BR:nwh04147]  Exosomal proteins   Exosomal proteins of other cancer cells    119418891 (col4a1) Glycosaminoglycan binding proteins [BR:nwh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    119418891 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  119418891 NCBI-ProteinID:  XP_037542111 LinkDB All DBs Position 13:complement(25365949..25419969) Genome browser AA seq 1636 aa AA seqDB search MLLPSGALLLLAAFCSNLDLTRAEGCGTSCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ GHEGPPGPMGPKGDFGAHGAPGLKGVRGPPGLPGMPGNPGLPGINGNDGPPGSPGIPGCN GTKGDRGRDGSSGFPGLQGPPGIPGSPGMKGDPGGVIGIVPLKGEQGFPGTPGLPGSPGL NGPTGPPGPRGYQGLKGDAGPPGPPGEKGDRLSFVGEKGEKGDPGLRGPPGPPGRPEEVG GTTTVFIPGPPGFPGVKGERGDKGFCLPYQLGVKGEPGPPGPRGKPGKDGDNGLKGEKGF AGAPGFPGSTGVKGDRGPPGNGGGPPGFPGPPGPAGSSGEKGFPGPQGEPGPPGQHFEGP RGEKGQKGEVGVKGDRGIEGQSFPGPPGKQGPVGPPGPPGPPIDLEECNIGKGDPGPPGP PGLTGEVGHKGDKGDACLSCEGTGPPGPEGVKGEQGPPGPGGFKGEKGRPGFPGEPGTPG SAGSPGLMGAPGAVGEPGDIYIAPGFKGEKGLPGHPGLQGQPGQDGLQGRDGLQGLQGPK GEPAKEGIKGERGPDGDPGLIGPPGERGPPGLPGYARPGEPGEKGSQGRPGVHGSPGPPG AKGDPGVGVSTPGPQGAPGPRGETGLPGLQGDRGPPGDSGLPGFPGEKGDHGLPGIGFPG PAGPKGISGIPGTTGLPGEPGKPGQDGSPGKPGPPGQKGEPGRGLPGPKGVQGYTGVTGF SGEKGNVGFPGVPGREGQTGPPGPQGLKGEVGPPGLSGPAGPPGPPGKGLPGPPGPHGPR GEPGPFGVEGIKGDKGYPGPPGLDMPGPQGEKGSPGLPGIQGSKGLPGPPGLQGIDGPTG NQGSKGEMGIMGTPGTPGFPGQPGIPGSPGSRGDPGFTGSRGDIGDPGLKGDRGDKGLPG PPGNLTKVEMEHLKGQKGDIGDPGHPGVTGERGYEGSQGDPGMPGKDGAPGLPGHQGDKG DPGFPGEPGVTGAPGPKGTVGEMGIPGPIGPKGTKGSIGTPGHTGFRGTDGEKGDPGVPG EPGIGLPGHPGEQGQTGQPGFPGPRGDKGEKGQEGMPGKPGLQGAKGDHGSTGYPGQPGR PGDKGITGLPGSAGDPGRDGRPGEGGLQGPPGVRGEKGEPGEDGIPGSTGERGDPGLPGV GLPGPPGTLGVKGDKGGAGVPGMPGHPGIPGLRGDKGLPGPLGPQGEPGEPGPPGISVEG PKGERGETGAVGETGSSGAPGPAGVPGRDGQKGETGAPGLPGYQGESGHKGDPGTPGLPG PTGLPGIDGQKGERGLQGVPGFPGTKGSVGDAGFKGEGGDRGFPGEKGNEGLPGPPGPQT FIKGDIGFPGNPGLPGPQGPSGFLGQKGQQGLTGIPGPKGDDGLPGFNGQSGAKGEPGLP GPQGPRGHPGPPGPDGVPGQVGPPGPSSMYHGFLVTRHSQAVDIPLCPYGTRLIYDGYSL LYVQGNERSHGQDLGTAGSCLKKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMSM APITGDSIKPFISRCVVCEAPAMVIAVHSQTIMIPPCPEDWDSLWIGYSFVMHTSAGAEG SGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSDMFRKPVPTTLKAG NLQTHISRCQVCMKRT NT seq 4911 nt NT seq  +upstreamnt  +downstreamnt atgctgttaccgtccggcgcgctcctgctgctggcggctttctgctccaacttagacctg acacgggctgagggttgtggaacgtcatgtggaaaatgcgactgcagcggtgtcaaagga gcgaagggtgagcgtggatttcctggtcttcaaggtaacatgggattcccagggatgcag ggacacgaggggccaccagggccaatgggccccaagggagattttggtgcacatggagct cctgggctgaaaggagtgcgaggccctcctggtctgccaggcatgccaggaaacccagga ctacccggcatcaatggaaacgatggtccacctggttcgcctggtatcccaggatgcaat gggacaaaaggggatagaggacgtgatggttcttctggttttcctggacttcaaggccct cctggcatcccgggatctcctggaatgaagggagaccctggtggtgtgattgggattgtt cctttgaaaggagaacaaggatttcctggcacacctggattacctggatcacctggtctt aacggacctactggaccaccaggacctcgagggtatcagggacttaaaggtgacgccgga ccccccggccctccaggagaaaaaggagaccgcttgtcttttgtgggtgaaaaaggagaa aagggagatccaggactcagaggtcctcctggtccccctggacgtcctgaggaagtggga ggaacgaccacggtgttcatacctggaccaccggggttcccaggagttaaaggagaaaga ggagacaaaggattttgcctgccttatcagcttggggtcaaaggtgaacctgggccaccg ggaccacgtggtaaacctggaaaagatggagataatgggctgaagggggagaaaggcttt gcaggagctcctggattccccggttcaacgggagtaaaaggagaccgaggaccacctggt aatggtggtggtccacctggctttcctggcccgcccggccccgcaggttcatcaggagaa aaaggttttccaggtcctcaaggagagcctggtccaccaggtcaacattttgaaggtcct cgaggagagaaaggtcagaagggagaagtgggtgtgaagggcgacaggggcatagaagga cagtcttttcctggaccaccagggaaacaaggaccagttggaccccctgggccacccgga ccaccaattgacctagaggagtgtaacattggaaaaggagaccctggcccacctggacct ccagggttaacaggagaagtaggacacaaaggtgataaaggagacgcctgccttagctgt gagggtactggtccacctggaccagagggtgtcaaaggagagcaaggacctccaggtccg ggtggttttaaaggagaaaagggtcgtcctggcttccctggagaacctggaactcctggc tctgcaggaagtcctggactgatgggagcccctggtgctgttggtgaaccaggagacatt tacatagcaccaggttttaaaggggaaaaaggtcttcctggtcatcctggtttacagggg cagccaggtcaggatggacttcaaggaagagatggcctccagggtctacagggtcccaaa ggagaaccagccaaagagggtatcaaaggtgagcgtggacctgatggggaccctggtctt atcggacccccaggagaaaggggtcctccagggttaccaggatacgcccgaccaggagag cctggagagaaggggagtcagggaagaccaggagtgcatggatctcctggaccacctggt gcaaaaggtgatccaggtgttggggttagtactcctggacctcagggggcacctgggcca cgtggagaaactggtctacctggacttcaaggtgacagaggtcctccaggagattcaggg ttaccaggttttcctggagaaaagggtgatcatggactaccgggcattggatttcctggt ccagcaggtcctaaaggtatcagtggaattccaggaaccacaggattacctggagagcct ggaaaaccaggacaggatggctcgcctggaaagcctgggccccctggacagaaaggtgaa cctggacgaggtcttccaggtccaaaaggtgtacagggctacacaggagttacaggtttc tcgggggagaagggtaatgttggatttccaggtgttcctggacgtgaaggacagacagga cctccaggacctcaaggtcttaaaggggaagttggacctccgggactttctggaccagct ggcccaccaggacctcccggaaaaggtttacctggacctcctggaccacatggaccacgt ggagagcctggaccttttggcgttgaaggtataaagggagataagggttaccctggtcct cccggtcttgatatgccaggccctcaaggagagaaaggaagtcctgggctcccaggaatc caaggttctaaaggactcccagggccaccaggattacaaggcatagatggaccaactggg aaccaaggttcaaaaggtgaaatggggatcatgggaacaccaggaaccccaggatttcct gggcaaccagggatacctggatctcctggttcgagaggtgatcctggttttactggatca agaggagatattggagatcctggacttaaaggtgacaggggagataaaggtcttccagga cctcctgggaacttgaccaaggttgaaatggagcacttgaagggccaaaagggagacatt ggagacccaggccaccctggtgtcactggagaaaggggctatgaaggatcccaaggagac cctggaatgcctggcaaagacggggctcctggattacctggacatcaaggtgataaagga gatcctggttttcctggagagcctggcgtgacaggagcaccgggtcccaaaggcactgtg ggcgagatgggaataccaggtccaattggtccaaagggtactaaaggaagtattggtaca ccgggtcatacgggattccgaggcacagatggtgaaaagggagacccgggagtacctggt gagccaggtattggtcttcctgggcatccaggagaacagggtcagactggccagccaggg tttccaggaccacgtggggataaaggtgagaagggtcaagagggaatgcctgggaaacct ggactgcaaggagccaaaggagatcatgggagcaccgggtacccaggtcagcctggtaga ccaggagataagggtatcactggactccctgggtctgcaggagacccaggtcgtgatggc cgtcctggtgaaggtggtctacaagggcctcctggtgttaggggagagaagggggagcct ggagaggatggcatccctggatccaccggggagagaggagacccaggtctacctggtgta ggtttgcctggaccacctggaactcttggtgtcaaaggtgacaaaggtggtgcaggtgta cctggcatgccaggtcatccaggtatccctggcctcagaggagacaaaggacttccaggc ccactgggaccccagggagaaccaggagagccaggtcctccaggcatctctgtagaaggc cccaaaggagagaggggagaaacaggagcagttggtgaaacaggatcctcgggagcacca ggacctgctggtgtgccaggcagagatggacaaaaaggagagactggtgctccaggttta cctggttaccagggagagtcaggacacaagggagaccctggaactcctggacttcctggt ccaactggactccctggtattgacggtcagaagggagaacgaggattacagggtgttcca ggcttcccaggtaccaagggttctgttggggatgctggattcaaaggagaaggaggtgac cgaggattccctggagaaaaaggtaatgaaggtcttcctggcccccctggcccccagacc ttcatcaaaggagacattggtttcccaggaaatccaggattgcctggtccccagggccca tctgggtttcttgggcaaaaagggcagcaaggtttgacgggtattccaggtccaaaaggt gatgatgggctccctgggtttaacggtcagtcaggagcaaaaggagagcctggtctgccg gggccacaaggacccagagggcatcctggccctccaggacccgatggtgttccaggtcaa gtgggtccacctggcccatcctccatgtatcatggcttcctggtgactcgtcacagccaa gcagtggacattccattatgtccttatgggactaggctgatatacgacggctactcttta ctttatgtgcaaggcaatgaacgctcccatggacaagacttgggtacggcaggcagctgt ctaaaaaagttcagccctatgcccttcctgttctgcaatatcaacaacgtttgcaacttt gcctctcgtaatgattattcctactggctcacctcacccgagcccatgcccatgagcatg gcacctattaccggggacagcatcaaaccctttataagcagatgtgttgtgtgtgaagct ccagccatggtgatagctgttcacagtcagaccatcatgatcccaccatgccctgaagac tgggactctctgtggattggttactccttcgttatgcacaccagtgcaggtgctgagggt tcgggccaggccttggcctctcctggatcctgtttggaggagttccgtagcgctccgttc atcgagtgtcatggtcgaggaacctgcaactactacgccaactcctacagcttctggctc gctaccatcgaagacagtgacatgtttaggaaacctgtcccaacaactctaaaagcaggc aatctccaaacccacataagccgctgtcaggtgtgcatgaagaggacataa

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