Nematolebias whitei (Rio pearlfish): 119419085
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Entry
119419085 CDS
T08042
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03420
Nucleotide excision repair
nwh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119419085 (ercc1)
03460 Fanconi anemia pathway
119419085 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119419085 (ercc1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119419085 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
119419085
NCBI-ProteinID:
XP_037542312
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All DBs
Position
13:17715840..17719084
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AA seq
350 aa
AA seq
DB search
MKRFHINLDDSAFTKGRAPPKPQFQSSSGQQNSTPSTASTIKPAAKQVQTLSYAEYIVQS
KSNVAAVPQRDSSSQELRSEGAGLCGLKQGDSESSIKGGGCETDQDYVKDIEAQPERVKK
SEETLMAEGNFQKSNPSVKGPKPVGSGSSIIVSPRQRGNPILKFVRSVPWEFGEVVPDYV
LGQTTCALFLSLRYHNLNPNYIHDRLKLLGNTFTLRVLLVQVDVKDPHHALQELARICIM
ADCTLILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKDYLSKVTDCLTTVKSVNKTDAV
TLLSTFSSVEGIINASKEELVLCPGLGPQKARRLHDVLHKPFLKSKTENS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttcatatcaaccttgacgattcagctttcactaaaggaagagcaccgcca
aagccacagtttcagtcttcatctggacaacaaaactctacaccttcgactgcttctacc
ataaagcctgctgccaaacaagttcagaccctgtcttatgcagaatacatcgtccagagt
aaaagtaatgtcgctgctgttccacagagagattcatcctcccaagagctcaggagtgaa
ggtgctggactctgtggtctgaagcaaggagattcagaatcatccatcaaaggaggaggt
tgtgaaacggaccaagattatgttaaagacattgaagctcaaccagagcgagtgaaaaag
agtgaggagacactgatggctgaggggaacttccaaaaatcaaatccaagtgtgaagggt
cccaaaccagtggggtctgggagcagcattattgttagtcctcgacagagaggaaatcct
attctgaagtttgtgaggagtgtgccatgggagtttggagaagttgtgccagattatgtt
ttgggacagacaacctgtgccctcttcctcagtttgaggtatcacaacctaaatccaaac
tatatccacgatcgtttaaagctgcttggaaacacattcaccctgcgtgtgctgctggtt
caagtagatgtgaaagatcctcatcatgcattacaggagctggctcgtatctgtatcatg
gcagactgcacgcttatcttggcttggagccccgaagaagcaggacgctacctggaaaca
tataagtcatatgagaagaagccagctgacctcctaaaggagcaagttgaaaaagactat
ctctcaaaggttacagattgtctgacgactgtgaaatctgtcaacaaaactgatgccgta
actttgctgtccactttctcatctgtagaaggaatcatcaatgcctctaaggaagagttg
gtgctctgccccggccttggaccacaaaaggcaagacgtcttcatgatgtgcttcacaaa
ccttttctcaagtcaaagacagaaaacagctga
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