Nematolebias whitei (Rio pearlfish): 119419093
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Entry
119419093 CDS
T08042
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119419093 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119419093 (xrcc5)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119419093 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
AAA_21
Motif
Other DBs
NCBI-GeneID:
119419093
NCBI-ProteinID:
XP_037542319
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All DBs
Position
13:18010652..18019104
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AA seq
724 aa
AA seq
DB search
MAGSKSALVLCMDVGFSMSNSAPGEESPFDSAKKVIQKFVQRQVFAETKDELSLVLFGTD
STKNPLSQDGQYQNITVHCPFMVPDFTLLEEIEHQLHPENQQGDWLDALVVCMDLLQTQT
RGKKYDRLSIILLTDLNAAASSDNLDVIVENLKKAGITLQFFLPFPVEDDEEGQGDGDRR
GPGDPGAGKGLSREQKSGLEMVKHIMLSLYEEEGLDEIYTFRNAVEQLCMFKRIERRPVA
WPCQLTIGSSLSIPIVGYKAVTEEKLKKTWITVDAQSKKKDDVKKETVYCLDDDNETEVQ
REDIIQGFRYGSDIVPFSKIDQEQMKYKHDGKCFAVLGFTKQNMILRHLFMGSNVLKIFP
ARDDEHAAVALSALIRALDELKMVAVVRYAYNRCSNPQVGAAFPFIKPSYECLMYVQLPF
LEDLRHYLFPSLDKNKKIAPSEPQLSAVDSLIDSMMLVGEDENHDQKDLFKPHHLPNPHF
QRHFQCLHHRAVHPDSPLPAMEPWLAAALDRPEVIKERCQAPLEALKKLFPLTEVEKKKR
LKTSAQIFGKDSEEPDAKKAKEDEAEEYNLADIAEGSVSSVGSVDPARDFRTLIKQKSLP
FGEVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRSIPS
RGLEVFWDLLVQDAVTLISKVEVEASTVSRDEANQFLMAEEKKEEAAAVPAEDTGDVDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttccaaatcagctctggtgctgtgcatggatgtgggcttctccatgtccaac
tcagccccaggggaagaatctccttttgattctgcaaaaaaagtcatccagaagtttgtt
cagcgccaggtttttgcagaaactaaggatgaactgagtttagttctgtttggtacagat
tctactaaaaaccctctgagccaagatggccagtaccagaacatcacagtgcactgtccc
ttcatggtgccagactttacgcttctggaggagattgaacaccagctccatccagagaat
cagcagggagactggctggatgctcttgtcgtttgcatggatcttcttcagacccaaact
cgtgggaagaagtacgatcgtctgagcatcatcctgctgacggacttgaacgctgcggcc
agttctgacaacctggatgtgatcgttgaaaacctgaaaaaagctggaatcaccctgcag
ttttttttgcctttccctgtcgaggatgatgaggaaggtcaaggtgatggagacagaaga
ggacctggtgaccctggtgcaggcaaaggtctgtccagggaacagaaaagtggtctggag
atggtgaagcacatcatgctaagcctatatgaggaggagggcctggatgaaatatacaca
ttcaggaatgcagtcgagcagctgtgcatgtttaaacgcattgagaggagacccgtggct
tggccctgtcagctgaccattggcagctccttgtccatccctattgtcggctataaagct
gtgactgaggagaaactgaagaaaacgtggattacggttgatgctcaaagtaaaaagaag
gacgacgtgaagaaagagacggtctactgcctggatgacgacaacgagacagaggtgcag
agggaggacattatacaaggttttcgttatggaagcgacattgttcctttctccaaaatt
gatcaagagcaaatgaagtacaagcatgatgggaagtgcttcgctgtactgggcttcacc
aaacagaacatgatacttcgccatctgttcatgggatcaaatgttctcaagatatttcct
gcccgagatgatgagcatgcagcagtggccctgtcggctcttattcgtgcgctggatgaa
ctcaaaatggtggccgttgtacgatacgcctataaccggtgcagcaaccctcaagtgggc
gctgctttcccgtttatcaagccgagctatgagtgtctgatgtacgtccagctgcccttc
ttggaagacctcagacattatctgttcccgtcgctggacaaaaacaaaaagatcgctcca
tcagagccgcagctgtcagccgtagacagtctcattgactccatgatgctggtaggagaa
gatgaaaaccatgaccaaaaggatttgttcaagccccaccatcttcccaacccgcacttc
cagaggcacttccagtgtctgcaccaccgagcggtgcacccagattctcctcttcccgcc
atggagccatggctggcggctgctctcgatcgccccgaggtcatcaaggaacgctgccaa
gctccgctggaggctttaaagaagctgtttcctctcaccgaagtggagaagaagaaacgg
ctcaagacgagcgctcagatttttggcaaagattccgaggagccagatgctaaaaaagcg
aaggaagacgaagcagaggagtataacctggcagacatcgctgaaggttctgtttcttct
gtggggagcgttgatccggcccgagacttccgcactctgatcaagcagaagagtcttcca
tttggggaggtctgtcagcaactgactcacaggattgagcagttgcttagcaacaagaac
acacactactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgttaag
caggggaatgctgatctgttcaacagttaccttcagtccctgaaaaggagcattcccagc
agaggcctcgaggtcttctgggacctgctcgttcaagacgctgtaacgctgatcagcaag
gttgaggttgaagcgagcactgtttcaagagacgaagctaatcagtttttaatggctgag
gaaaagaaggaagaagcagctgcagttccagctgaagatacgggagatgttgatgacttg
ctggacatgatgtaa
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