Nematolebias whitei (Rio pearlfish): 119419224
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Entry
119419224 CDS
T08042
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03083
Polycomb repressive complex
nwh04110
Cell cycle
nwh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119419224 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119419224 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119419224 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119419224 (tfdp1a)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119419224 (tfdp1a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
119419224 (tfdp1a)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
119419224 (tfdp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
119419224
NCBI-ProteinID:
XP_037542461
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Position
13:26334060..26353841
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AA seq
412 aa
AA seq
DB search
MAKDAGLIETNGELKVFIDQNLSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNVTTH
MQHVSHMVIGTPQRPTVSNTILLNSPHTPSSQFLTQSQPADASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSADNHMSPNDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEAERQKRLERIKQKQSQLQELILQQIAFK
NLVQRNRQTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSAEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYTAGSDGCTDGTIASSSNDSHYSGSRVETPVSYMGDDDEDEYEENDDED
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctgattgaaacaaatggagagctgaaggttttcatcgatcag
aatctgagccccagcaaaggtgtcctctctttggttactgtccagcctacagctgcccct
gtggccaaacaactactacccaaaacccttgggccgtccaacgtgaatgttactacacac
atgcaacatgtgtcacacatggtgattggaacaccccaaaggccaacagtatcaaatacg
attttgttaaacagtccgcacacaccgagctctcagttcctcactcagagtcaaccagct
gatgcctctccttggtcgtcaggaaagcggggtaagaaaggggagaagaatggaaaaggt
ttgaggcatttctccatgaaagtgtgtgagaaggtgcagaagaaaggagtgaccacttac
aatgaagtggcagatgagctggttgcagaattcagctctgcagacaaccacatgtcacct
aatgactcccacgtgtatgaccagaagaacattcggcggcgtgtttatgatgcactgaac
gtgctcatggccatgaacatcatctcaaaagagaaaaaagaaatcaagtggattggcttg
cccaccaactctgcgcaggagtgccaaaacttagaggcggaaagacaaaagaggctggag
aggatcaagcagaaacagtcacagcttcaggagctcatactgcagcaaatagcctttaag
aacctcgttcagaggaacagacagacagagcagcaagcaaacagacctccacctcccaac
tccatcatccacctccccttcataatagtcaacaccagcaaaaagactgtgatcgactgc
agcatctccaatgacaagttcgagtatttgttcaattttgacagcatgtttgagattcat
gatgacattgaggtgctgaaacgaatgggcatggcctgtggcttggaggtgggaaagtgt
tctgcagaggatctgaaagttgcacgcagcctggtgcccaaagctttggagccttatgtt
atagagatggcaaaaggtccgatcagtaatgtgtacatcacaggaggatcctcagccaac
ggagcccgttacactgccggcagtgatggttgcacagatggcaccattgcgtctagttcg
aacgactctcactacagcggctctcgtgtggagactccagtgtcttacatgggcgatgac
gacgaggatgagtatgaggagaacgatgatgaagactaa
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