Nematolebias whitei (Rio pearlfish): 119419356
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Entry
119419356 CDS
T08042
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119419356 (ift88)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119419356 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_16
TPR_19
TPR_14
TPR_7
TPR_11
TPR_9
ANAPC3
TPR_17
ARM_TT21_4th
TPR_CcmH_CycH
SNAP
TPR_10
TPR-S
ARM_TT21_5th
DUF2225
ARM_TT21_N
RPN7
HAT_PRP39_C
TPR_MalT
ARM_TT21_C
Coatomer_E
HEAT_Nup120
Consortin_N
ARM_TT21_2nd
TPR_15
RNPP_C
SPO22
Motif
Other DBs
NCBI-GeneID:
119419356
NCBI-ProteinID:
XP_037542593
LinkDB
All DBs
Position
13:44790440..44841726
Genome browser
AA seq
798 aa
AA seq
DB search
MENVHLAVEEDDLYSGYNDFNPTFDSEDLENDLGFQQAVRTSHGRRPPSRVPLATSMGRP
MTGAVQEGATRPMTAVRAAGYTSSMARGNMFHPLTGSCGSASTIEAKKKPTPEEKIKLLE
KKVNDLIEESCVAQSTGNLQLALEKAKEAGRKERALVRQREQSGTADHINLDLTYSVLLN
LANQYENNEMYPEALNSYQVIVKNKMFSNAGRLKVNMGNIYFKQKNYPKAIKFYRMALDQ
ISNTHKDMRIKIMQNIGVVFVRLGQYSDAITSFEQIISESPNIKAGFNLILCYYAIGDRE
RMKKAFQKLISVPLGIDDEDKYISSNDDTSLNMVIEAIKNDRLHQMERDLKVRAERYIMT
AAKLIAPVIETSFAIGFDWCVDMVKSSQYVELANDLEINKAITYLRQRNFNQAVETLKTF
EKKDSRVKSAAATNLSCLYFLEKDYDQADRYADLAMNADRYNPAALINKGNTVFLKQDYE
KAAEFYKEALRNDSSCTEGLYNLGLTYKRLDRLEEALDCFLKLHAILRNSDQVMYQLAIL
NELLGDPQQAIEWLMQVISVTPTDPHALAKLGKLYDDEGDKSQAFQYYSESYRYFPCNID
VIEWLGAYYIETQFCEKAIQYFERATLIQPAQVKWQLIVASCFRRSGNYQKALETYKEIH
RKFPENVECLRFLVRLSTDMDLKEVQEYATKLKKVEKMKEVREQRVKSGRENSARSRREG
REGSGGSADSGHSSGSTRGERLSAKMRSLPASNEPYEASGPKELDASYMDPLGPQVERPK
TGAKKHMDDDDFADEVLG
NT seq
2395 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtacatctggctgtagaggaggatgatctttactcaggttacaacgacttt
aatccaacatttgactcagaggatctggagaatgatttaggcttccagcaagcagttcga
acaagtcatggaagaagacctccgtctcgtgtgcctttggccacctcgatgggcagacct
atgactggagctgtgcaggagggggcaactcgaccaatgactgctgtcagagcagctggg
tacacttcctctatggcgcgtggtaacatgttccaccccttaactggtagctgtggctct
gcctcaacaattgaggcaaaaaaaaaacccacgcctgaagagaagatcaagctcctggag
aagaaagtgaatgacttgatagaagagagctgtgtggcacagagtacaggaaacctacag
ttggctcttgaaaaagccaaagaggcgggcaggaaggagagagcgctggtcagacagcgg
gaacagtctggcactgccgatcacatcaatctagacctcacctactctgtattgctcaat
cttgccaaccaatatgagaacaatgaaatgtacccagaagccctgaacagctaccaggtc
attgtcaaaaacaagatgttcagtaatgcaggccgcctgaaagtcaacatgggaaacatc
tacttcaaacagaaaaactaccccaaagcaatcaagttctaccgcatggctctggatcag
atctctaacactcacaaagacatgaggatcaagatcatgcagaacattggtgtggtcttt
gtccgcttgggccagtattcagatgccataacctcttttgagcaaatcataagtgagagt
cccaacataaaggcaggcttcaacctgatcctgtgctactatgccattggagacagagag
aggatgaagaaggcctttcagaagctcatctctgttcctctgggtattgacgatgaagac
aagtacatttcttctaatgatgacactagcttgaatatggtgattgaagccattaaaaac
gacaggcttcaccaaatggaaagagatttgaaagtccgggctgagaggtacatcatgact
gcagccaagctcatcgccccagtcattgaaacatcctttgctattggatttgactggtgt
gttgacatggtgaagagttctcagtatgttgagcttgccaatgatctggagatcaacaaa
gccatcacgtatctgagacagagaaacttcaaccaggccgtggaaacgctgaagaccttt
gagaagaaggacagcagggtaaaaagtgctgcagccactaatctttcttgtctctatttc
ctggaaaaggattatgaccaggctgaccgatatgctgacctcgccatgaacgctgatcgt
tacaaccctgcagctcttatcaacaagggcaataccgtgttcctcaaacaggactatgaa
aaggctgcagagttttacaaagaggctctgagaaatgattcctcgtgcaccgaagggctc
tataatctgggtctgacctataagagactggaccgtttggaggaagctctggattgtttc
ctgaagcttcatgccatcctgagaaacagtgatcaggttatgtatcagctggccattctt
aacgagctgctgggagatcctcagcaggcaatcgagtggctgatgcaagtcatcagtgtg
actcccactgacccccacgcattggccaaactgggaaaactgtatgatgatgaaggagac
aagtcccaggctttccaatactacagtgagtcctacaggtactttccctgcaacattgat
gtgatcgagtggctcggggcttactacatcgagacacagttctgtgagaaggccatccag
tactttgaaagagccacactcatacaaccagcgcaggtgaaatggcagctaatagtggcc
agctgtttcagaagaagtggaaactatcagaaagctctggaaacttataaagagatccat
cgcaagtttccagaaaacgtagaatgtttgcggttcctggtgaggctgtccacagacatg
gatctgaaggaagtccaagaatatgccaccaagctgaagaaggtagagaagatgaaggag
gtcagagagcagagggtgaagtcaggacgggagaacagtgcgagaagtcggcgagaaggc
agagagggcagcggagggagcgctgatagtggccacagcagcggcagcactagaggagag
cgtctcagcgccaagatgaggtcacttcctgcttctaatgagccctacgaagccagcggc
ccgaaagaactcgatgcgtcctacatggacccactggggcctcaggtggaaagaccaaag
acaggtgcaaagaagcacatggatgatgatgactttgcagatgaagtgctgggag
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