Nematolebias whitei (Rio pearlfish): 119419467
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Entry
119419467 CDS
T08042
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119419467 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119419467 (hspd1)
03110 Chaperones and folding catalysts [BR:
nwh03110
]
119419467 (hspd1)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119419467 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119419467 (hspd1)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
119419467 (hspd1)
Messenger RNA biogenesis [BR:
nwh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
119419467 (hspd1)
Chaperones and folding catalysts [BR:
nwh03110
]
Heat shock proteins
HSP60 / Chaperonin
119419467 (hspd1)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
119419467 (hspd1)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119419467 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
119419467 (hspd1)
Exosomal proteins of breast cancer cells
119419467 (hspd1)
Exosomal proteins of colorectal cancer cells
119419467 (hspd1)
Exosomal proteins of bladder cancer cells
119419467 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
119419467
NCBI-ProteinID:
XP_037542701
LinkDB
All DBs
Position
13:2906478..2910748
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AA seq
575 aa
AA seq
DB search
MFRLASIMKQVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVETVIDELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKKVGRKGVITVKDGKTLQDELELIEGMKFDRGYISPYFINAAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGNPADVEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPSLDNIKTANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGPSEMGYDAMQGEFVDMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTELPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtttagccagcatcatgaagcaggtgaggcccgtgagccgggctctggctcct
cacctcacacgggcctacgccaaggacgtgaagtttggcgccgacgctcgagccctcatg
ctgcagggggtggacctgttggccgatgctgtggctgtcacgatgggcccgaagggtcgc
acggtgatcatcgagcagagctggggcagccccaaggtcacgaaggacggcgtaactgtg
gccaagagcatcgacctgaaggaccggtacaagaacatcggagccaagctggtgcaggac
gtggccaacaacaccaacgaggaggccggtgacggcaccaccaccgccacagttctggct
cgcgccatcgccaaggagggctttgataacatcagcaaaggtgccaaccccgtggagata
cgccgcggcgtcatgatggctgtggaaacagtcatcgatgagctgaagaagctctccaag
cccgtcaccacccccgaggagatcgcacaggttgctacaatctcagccaatggagacgta
gagatcggcaacatcatttccaacgcgatgaagaaagttggccgcaaaggagtcatcaca
gtcaaggatgggaagacgctgcaggacgagctggagctcatcgaaggcatgaagttcgac
cgcggttacatctcgccgtacttcatcaacgccgctaaaggtcagaagtgtgagttccag
gatgcgtacctgctgctcagcgagaagaagatctccagtgttcagagcatcgtgccggcc
ctggagatcgccaaccagcaccgcaaaccgctggtcattgtagcagaggatgtggacgga
gaagctctgagcacgctggtgctcaacaggttgaaggtcgggcttcaggtggtcgcggtc
aaagctccaggcttcggtgacaacaggaagaaccagctgaaggacatggccatcgccacc
gggggcacggtgtttggggacgaagctctgggtctggctctcgaggacattcaggcccac
gactttggcaaagttggcgaggtgcagatcaccaaagatgacaccctgctgctgaagggc
ggtggcaacccagccgacgtggagaaacgagccgcggagatcgccgagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgagaggctggccaagctgtcggacggc
gtggccgtgctcaaggtgggaggaacgagcgacgtcgaggtgaacgagaagaaggaccgt
gtgacggacgccctgaacgccacgcgagcagctgtggaggagggcatcgtgctcggtggg
ggctgtgctctgctgcgctgcatcccctcgctcgacaacatcaaaaccgccaacagcgac
cagaaaataggtgtggacatcatcaggcgggcgctccgtattcccgccatgaccatcgcc
aagaacgccggcgtggagggttctctggtggtggagaagatcctgcaggggccgtctgag
atgggctacgacgccatgcagggggagttcgtcgacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcgctcttggatgctgcaggagtcgcgtctttgctgtcc
actgccgaggccgtggtcacggagctgcccaaggaggagaaggagatgccaggagggatg
ggaggcatgggggggatgggaggaatgggaggcggcatgggtttctga
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