Nematolebias whitei (Rio pearlfish): 119419475
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Entry
119419475 CDS
T08042
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119419475 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119419475 (lrit1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
fn3
LRR_1
Ig_2
LRR_14
C2-set_2
LRR_5
Pur_ac_phosph_N
C2-set_3
RNA_pol_Rpb1_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119419475
NCBI-ProteinID:
XP_037542716
LinkDB
All DBs
Position
1:66110321..66114711
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AA seq
652 aa
AA seq
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MLSVLVLLGLGVATFELFPPVSCCPSQCSCFYHNLSDGSKARSVICNDPDISLVPVGFPV
DTSKLRIEKTSVQQIPSEAFIYLSSLEFLWMSFNTLSALSPNSFRGLFNLEELRLDGNAL
TAFPWESLMDMPSLRLLDLHNNQLTSLPAEATIYIKNLTYLDLSSNSLLTLPAEVLSTWL
AAKPTQGPESSKMILGLHDNPWVCDCRLYDLVQFQKSPTLSVAFIDTRLRCSAPESLSGV
LFSDAELRQCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRRADGRNLNGTVQQ
ETSKEGITWSILSVSAVSQLDSGKFICKATNYAGNAEAVISLMVSNSPKPEGNQTNADKK
AKVKKQNQMGKAAYQEKLVARYVAPTSTPSNLPAMDADLMPGLASDSGLVGYSLTDRVTQ
EPGTSSNSDTLLDLEKTNLSNLSANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAK
NTTAYSVLYAVFGERDMRKINVGAGQTRVTIDGLVPRTKYIACVCVKGLIPKKEQCVIFS
TDEAASATGTQRLINVIVITVACVIAVPLTVIVCCGALKRRIKKYWGKKSKDIQDSYVTF
ETLSPGTKAKGLEGEYLNRLNPEESNRLLSARSSLDSESTAKIEGQPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgtcctggtgctgctggggctcggcgtggccacctttgaacttttcccccca
gtgagctgctgcccttcacagtgcagctgtttctaccacaacctaagcgatggatccaaa
gccaggagcgtaatatgcaacgaccccgacatttctcttgtgcctgtcgggttcccagtt
gacacatcgaagttgcgcatcgagaagacgtccgtccagcagattccaagcgaagccttc
atctacctctccagtctggaattcctatggatgtccttcaacacgctctcggctctgagc
cccaacagtttccgggggttgttcaacctggaagagcttcgtctggatgggaatgctctc
actgcctttccctgggagtctctcatggatatgcccagcctcagactcctcgatttgcac
aacaaccagctcacctcgctgcccgcagaggccacgatttacattaagaacctcacctac
ctggatctgtccagtaacagcctgctgaccctgccggcggaggtgttgtccacttggctg
gctgctaaacccacacagggaccagagagctccaagatgatccttggtctccatgataac
ccctgggtgtgtgactgccggctctatgatctggtccagttccagaagtctcccactctg
tctgtggctttcatcgatacaagactccgctgttcagcccctgaaagtttgtcaggagtc
ttgttcagcgatgcagagctacggcagtgtcagctcccacgaatccacaccgcagtggca
cgagtccgtagtgcggttgggaacaatgtgctgcttcgttgtgggactatcggagttccc
attccagacctgacatggcgcagggcagacggacgaaacctgaatggaacagttcagcag
gaaacatctaaggaggggatcacatggtccatcctcagcgtctcagctgtgtctcagctt
gattcagggaaattcatctgcaaggcaacaaactatgctggaaatgcagaggctgtcatt
tctctcatggtctctaactcccccaaaccagagggaaaccagaccaacgcagacaagaaa
gctaaagtcaagaagcagaaccaaatgggcaaagctgcataccaagagaaactggtggcc
agatatgtagctccaacatccaccccttcaaatttacctgccatggatgctgacctcatg
cctggtcttgcttcagattctggactggtgggctacagcctgacagatagagtcacccaa
gagccaggaacctcctccaactctgacacgctgctggatctggagaaaacaaatctgagt
aacctatcggccaacacttcatcgctgcaacaggaccctgacagggtggtccgctcagtg
aaggtggtgggagacacagacaacacaatctctctgaactggagagcacccaaagccaag
aacacaacagcatacagtgtgttgtatgcagtgtttggagaaagagatatgagaaagatc
aatgttggagcaggccagacccgggttacaattgatgggttggtgcccagaaccaagtac
attgcctgtgtgtgtgtgaaggggctgatccccaagaaagaacagtgtgtgatattttcc
actgatgaagcagcgagtgctaccggcacccagaggctgattaatgtgattgtaatcacc
gtggcctgtgtcatcgcagtcccgctcactgtcattgtatgctgcggggcactgaagagg
cgcattaaaaagtattggggaaagaaatcaaaggacatccaagattcatatgtgactttt
gagacactttctcctggcacaaaggccaaagggctcgagggcgaatatttaaacagactg
aatccagaggagtccaacaggctgctgtcggcccgctccagcctagactcagaatccaca
gcaaagatagagggacagcctaacgagtacttctgctga
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