Nematolebias whitei (Rio pearlfish): 119419548
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Entry
119419548 CDS
T08042
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
nwh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119419548 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119419548 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119419548 (ranbp2)
03110 Chaperones and folding catalysts [BR:
nwh03110
]
119419548 (ranbp2)
04121 Ubiquitin system [BR:
nwh04121
]
119419548 (ranbp2)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119419548 (ranbp2)
Chaperones and folding catalysts [BR:
nwh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119419548 (ranbp2)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119419548 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_16
TPR_2
TPR_1
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_7
ARM_TT21_C
TPR_12
DUF1681
PPR_1
Motif
Other DBs
NCBI-GeneID:
119419548
NCBI-ProteinID:
XP_037542817
LinkDB
All DBs
Position
13:complement(14810012..14832111)
Genome browser
AA seq
3071 aa
AA seq
DB search
MRRSKAEVDRYVSSVQNSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLYEREGDINKAIGCYKRSVDLNPVQKDLVLKVAELLVDKKESDSRAEFWVEK
AAKLMPGHPSVFNLKERLLSRQGQQGWNQLFDLLQAELAARPADAHVNVKLVQLFCQDGR
LDEAVKHCLAAEKRGLLRNSLHWYTVVLHTLQEYLSHPSVSANEKMCRRLQREVLLTHCS
LLRITLSDSSVQSSLDAFRGFDQAMQMLSSVANRHNDDLFEVFMEMKGHLYLHAGTLLLK
LAHDRQQTWRAVSDHTALCYLLAYQVPRPKSKVTKRDSSAPQLLELLANDRQSQAGHMLF
NLSSDVSILIKEVVEVFGNRGGQESVFELLWGSQASPGSSFIANDDIRSICAEVPELSKL
ARWDTGSILLHSGELQHLSWLGLQWTLLGQRPPMRDWLQQLFPRLTLETSKLDTNSPESI
CLLDLEVFLYGVVFCSHCQLQDTAKISSEMSPQQQQLFEPRCLPLPLLRLLTTDRQREWW
DAIYSLIHKRAVPGTSAKLRMIVQHGLSTLRAGEKHGLQPALAIHWARTLSQTGDGMNSY
YDQKEYIGRSVHYWRVVLPQLEIIKNRRSVPEPLDPLFLHFRSKDIQISAVKGLEEEAKI
AYAVLLDIEGRTEEAIATLESISNLSSSWHLAQIYQRLAEEASNGVEETQDKCITFLRKF
RNYLSKIYNANADDIDKLPVSMEEVVDLLNDVNQQLGETGEDMDEENEKEMERQRALAHS
SPAHPAEISAAISHIKFSTPSPNKSIVSPSKRLLSPKTPPHWVEDQKSLLQMLCQQVEAL
KNEVHDLKHNASVNAGSPHHKLFGEGYRAEGLQDSFTPVQSYHGAPLTVATTGSSLYYNQ
SPAYNSQYLLRTAANVTPTKGLLYGVNRMPPQQHMYSYQPPTHTPPLQTTPACIYPPQEQ
AFGAPLRFDSPATSLLSPYSEDYYGQSVSQQTTNPSLPEPGYFTQPAVVPIQPPKSVEGK
SVDFGKLSFNQQAPSEVPRVSSFGAGPAAQSTPSTAFKFNSNFKSNDGDFTFSASQAKHS
ESLLGLLTSDIPSKADAVPEKPPAQEQPSSQTNIFTFGNKSVSSFSFTDSTQNTGSFFGK
VEQPFKFGDVTKPVFGLGKSMEQDKPAESDLDSTRGEEDEDGPHFEPIVPLPDKVDVKTG
EEEEEEIFCNRAKLYRFDTETKEWKERGIGNVKILKHNANRKVRLLMRREQVLKICANHY
ITADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKSKFEEAQRVVTQ
SPEKQTPQEKKESSKASKSLAAQFALKEGEWECSVCCVRNKPTDMQCVACQHASPQSSAK
PEVQAAGETKSSPFTFKFGTDSSKPSSSGSTFSGFSAFGASIPSSFKFGTSSTKPADTKT
SAFSFGFGSQFGKKPEQWDCNKCSAKNEASTDSCISCKALKTAIKTSVIAQVTPAAVAPA
AQPSVSVSDSGFGAQFSKKPGQWDCEVCEVRNEESADKCVACQSLNPAAKSTGGAPVASS
MPAVSAFGSEFANKDDQWDCNACLVRNKASATECISCHAPHETPSLAAMFAMKEGEWNCD
TCLVRNKASTDKCVACQAPNPNVKSTSSSASSAFSFSFGTKSASSQPSVTAFTVPFGSGS
TFQFGENKNSDASFKLETPQAAPTTTTSSAGFSFSMPIPAGDFKFGIQDTTKDSASSDDQ
TPSGSASSLLKTIADKHKEKENVTVSSAIQPEKEENPLIAGKGNAFSFADLAKSSGGSFQ
FGTKDPDFKGFSGAGEQVFSSLQETPTKAETSKNQEDDGMYKTEDHDDIQFEPVVQIPEK
VDLVTGEEDEQVLYSQRVKLFRFDTATSQWKERGVGTLKFLKNDTNGRLRVLMRREQVLK
VCANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAEEFKQKFEEC
QRLLLDIPLQTPHKLVDTGRTAHLIKKAEEMKSGLKDLKLFLTDDKTKIKDDDTQGDVTT
SGDVSGLAIKPHGETTGPSLEWDNYDLREGAIDDTADSSVYATPVSSSPLRKNLFRFGES
TGGFSFSFQPGISPSKSPAKLNLSRVSVGTDEEQDNTQDEERDGQYFEPVVPLPDLVEIS
TGEENEQVVFSYRAKLYRYDKEVKQWKERGIGDLKVLQNYSTKRVRLIMRRDQVLKICSN
HWITEMMKLEPMKGTEKAWVWSALDFAEEGEGKMEQLAVRFKLQETANTFKQVFEEAKVA
QEKGELMTPVTLRTAAPQDSAAAAPESTATAVCGAAAIAVLEETTRERSEPPSDVGPSAA
GSPSPINPLKAVVSPPKFVFGTDSLQKIFGTQRTLSETPTSASGLKTAEAESSVKHTSAA
PAFKMSTGLDFRLFKDNPMAFWTNTSTGQFETPAPLQAAGGSPGSDESSDVEIVYVKEPT
AEQAALARKLLLPLTFFCYKNEPGYTSNDETDDEDYESAVRALNGKLYPDPHEAAACSEV
VSSHEACALLSESDCQVVWEKKPTPEEEEKAKSLQLPPTFFCGLSTMDSDPDGDKPEDFE
TEVCKAHQDLVAQLKGAEPDSSSPASPSEEPTSAPSSSSAEASGIRSTSDEQTSDKPAET
LSETPSSSFPIDLSTKKSPEPKTKTETDAAASSTTTTGQDSSAFGFSSLGGFSFADLAKN
TEGFTFGTQDDNFSWVNAGAVVFGASGSSEAKSDADKEGSDEEEAPKNVDIHFEPIVSLP
EVETKSGEEDEEILFKKRAKLYRWDRDLDQWKERGTGDIKILFHPTKHFYRILMRRDQVM
KVCANHTISPSMKIKPMNAMDSALVWTATDYSDGEGIVEQLAAKFKTPEIAESFKKTFCE
CQIRMGQTSEDGSGVLSQMSRVQEHSKETNPRVFLTVAADGQPLGTITVELFSNVVPKTA
ENFRALCTGEKGFGLRDSIFHRVIPDFMCQGGDITNSDGTGGKSIYGGMFEDENFDVQHT
GPGILSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGWVRDGMDVVQKMGQLGTKGGPPT
KRLVITDCGQL
NT seq
9216 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagcaaggcggaagtggaccgctacgtttcatctgtacagaattcctctcct
tcactcaaagagaagccagtcaaagggtttttatttgctaagttgtactttgaagcaaaa
gaatatgaacttgcaaaaaggcatgtgtcagagtatctcaaggtgcaggaaagggatccc
aaagcacacaaattccttgggcagctctatgagagagagggagacatcaacaaagcaatc
ggatgctacaagcgctcagtggacttgaacccagtgcagaaggacctggtgttgaaggta
gccgagttacttgttgataagaaagaaagtgacagcagagcagagttttgggtggagaaa
gcagcaaagctcatgcctggacacccatcagtcttcaacctcaaggagcgtctgttgagt
cgtcagggccagcagggctggaaccagttgttcgacctccttcaagctgagctggcggca
cggccagctgatgctcatgtgaacgtgaagttggttcagctgttctgtcaggacggtcgg
ctcgatgaggctgttaaacattgtctggctgctgagaagagaggcctgctgcgcaacagt
ctgcactggtacaccgtggtgttgcacacgctgcaggagtatctgtctcatcccagcgtt
tctgctaatgagaagatgtgtcgacgtctccaaagagaagtgttgttgacacactgcagc
ctgctgagaatcactctgtctgacagcagcgtgcagtcaagcctagatgcattcagaggg
tttgatcaagcgatgcagatgctgagcagcgtcgccaaccgccacaatgatgatcttttc
gaagttttcatggagatgaaaggtcacctctacctgcatgctggcacgctgttgttgaaa
ctggctcacgatcggcaacagacctggagagctgtcagtgaccatactgcgctgtgctac
ctgctggcgtaccaggtccccagaccaaagtccaaagtgaccaaaagagactcgtcagcc
ccacagcttctggaactgctggcaaatgaccgacagagtcaggctggacacatgttgttc
aatctgagctctgatgtgtccattttgatcaaagaggtggtggaggtgtttgggaatcgt
ggtggtcaggagtctgtgtttgaactcctctggggttcacaggcctcccctggatcctct
tttatagccaatgatgacattcgctccatctgtgctgaagttccagagctctccaaactg
gccagatgggacacaggctctatcttgttgcacagcggtgaactgcaacatctgagctgg
ttgggactgcagtggactcttctgggccaaaggccacctatgagggactggttgcagcag
ctttttccaagacttaccctggagacatcaaagctagacaccaattcacctgagtcaatc
tgcctgctggatctggaggtgtttttgtatggtgtggtgttctgcagccactgtcagctc
caggacacggcgaaaatcagcagcgagatgagtccacagcagcagcagctctttgagcct
cgctgcctcccgcttcctctcctccgcctcctgaccactgacaggcagagggagtggtgg
gacgccatctacagcctgatccacaaacgagcagttcccggaacgtcggccaagctgcgg
atgattgtgcagcatggactgagcactctgagggctggagagaaacacgggctacaacca
gcgctggccatccactgggctcggactctcagccagacgggagatggaatgaactcgtat
tatgaccagaaggagtacatcggccgcagtgttcactactggagagtcgttttgcctcag
ttggaaataattaaaaacagaaggagtgtaccagagccccttgaccctctcttcttacac
tttcgctccaaggatattcagatttctgctgtgaaaggtttggaagaggaagccaaaata
gcatatgctgttctcctggatatagaaggcagaacagaggaggcgatcgccactttggaa
agcatcagtaacctgtcctcctcctggcatttggcacagatctatcagcggctggcagaa
gaggcaagcaatggagtggaagagacccaagacaagtgtataactttcctgagaaagttc
aggaactatctgtcaaagatctacaatgccaatgcagatgatatcgataagcttcctgtg
tccatggaggaggtggtggacctcctgaatgatgtaaaccagcaactcggggagactggg
gaggacatggatgaagagaatgagaaagagatggagcgtcaaagagcactcgctcactcc
agcccggctcatcccgcagaaatcagtgcagctatttcccacatcaagttttctactcct
tctccaaacaaaagcattgtttctccttctaaaagactgctctcaccaaagaccccacct
cattgggttgaggaccagaaaagtctccttcagatgctctgtcagcaggttgaagctctc
aagaatgaggttcatgatctgaaacacaacgcttcagtgaacgcaggttctcctcatcat
aagttatttggggaaggctacagggcagaaggcttgcaggattcttttacccctgtccag
tcctatcatggagcccctctaacagttgccactacaggttcctctctgtattacaaccaa
tctccagcttataactctcagtatcttttgcgcacagcagcaaatgtaaccccgaccaag
ggtttattgtatggtgtgaaccgtatgccaccccaacagcacatgtattcctaccagcca
cccactcacacacctccattgcagacaaccccagcttgcatctaccctccacaggagcaa
gcgtttggcgcccctctacgatttgactcaccagccacaagccttctttccccgtacagt
gaagattattatggccagagtgtttcccaacaaaccactaacccgtctctgcctgaacca
ggttacttcacccagccagctgtagtccctattcaaccaccaaagagtgtagaggggaag
tctgtggactttggaaagctttccttcaaccagcaagctccttctgaagttcccagggta
tcaagttttggtgcaggaccagctgcccagtctacaccttcaaccgcttttaaatttaac
tctaattttaaatccaatgatggagattttactttctcagcttctcaagctaagcacagc
gagagtttgcttgggctactcacatcagacattccctcaaaagctgatgcagttccagaa
aagcccccagcccaggagcagccctccagccaaactaacattttcacctttggcaataaa
agtgtctccagcttctcgttcactgattccacacaaaacaccggaagcttttttggaaag
gtggagcagccatttaaatttggtgatgtgactaaaccagtgtttggcctcggcaagagt
atggagcaggataaaccagctgagagtgaccttgatagcacacgtggtgaggaagatgag
gatggtcctcactttgaacccattgtacctcttcctgacaaagtagatgtgaaaacgggt
gaggaagaggaggaggaaattttttgcaacagggcaaagctgtatcgatttgacacggag
acaaaagagtggaaagaacgaggcattggcaacgttaaaatcttgaagcacaacgctaat
aggaaggtccgtctcttgatgagacgggaacaagttcttaaaatctgtgcaaatcactat
atcactgctgacatgctgctgaaaccaaatgctggctctgacaaatcctgggtgtggaat
gccattgattatgcagatgaagagcctaaaccggaacaactggccattcgcttcaaaaca
gtagatgaggctgctcttttcaaatcgaagtttgaggaagcccagagggttgttacccaa
tcacctgaaaaacaaactccacaagagaaaaaggaaagttccaaggcctcgaagtcacta
gcagcccagtttgcactcaaagaaggagaatgggagtgctctgtgtgctgtgtaagaaat
aaacccaccgatatgcaatgtgtggcttgtcaacatgccagtcctcaatcttcagcaaaa
ccagaagttcaggctgctggggaaaccaaatcaagcccattcacgttcaaatttggtacc
gattcatcaaagccaagcagttctggctctacattttctggatttagtgcttttggagcc
tctataccatcctcgtttaaatttggcaccagctccacaaaacctgcagacacaaaaacc
agtgcattctctttcggctttggatcacagtttggtaaaaagccagagcagtgggactgt
aacaagtgttctgcaaaaaatgaagcctccacagacagttgcatttcatgcaaggctctt
aaaactgcaattaaaacatctgtgatagcacaagttacccctgctgcagttgcacctgca
gcacagccttctgtgtctgtcagtgactctggatttggtgcacagttcagtaagaagcct
ggacagtgggattgtgaggtatgtgaagtgagaaacgaagaatctgctgacaaatgtgtt
gcctgtcaaagtctaaaccctgcagcaaaatctaccggtggggctccagtagcatcaagt
atgccagcagtgtcagcatttgggtctgagtttgctaataaagacgatcagtgggattgc
aatgcctgcctggtcagaaataaagcatctgctaccgaatgcatttcctgccatgctcca
cacgaaactccctctttagcagccatgtttgccatgaaggaaggagaatggaactgtgac
acttgtcttgtcagaaacaaagcctctactgacaaatgtgtggcctgtcaggctccaaat
cctaatgttaaaagcacaagcagttctgcttcctctgccttcagtttttcctttggaacc
aagagcgcatcaagccaaccttctgtaactgcattcacggtgccttttggaagtggcagc
acttttcagtttggtgaaaacaaaaactcagatgcttctttcaagcttgaaactcctcag
gctgcacctactaccaccacaagttctgcaggcttctctttctcaatgcccattccagct
ggtgacttcaagtttggcattcaggacacaacaaaagactcggcttcatccgatgatcaa
acaccatcagggtcggcctctagtctccttaaaaccatcgctgacaaacataaagagaaa
gaaaatgtgactgtatcttctgcgatccaaccagaaaaagaagagaatccattaattgct
gggaaaggtaatgcattcagctttgcagacttggcaaaatcctctggagggagcttccag
tttggcacaaaagatcctgatttcaaaggtttctctggggctggagaacaggtgttctca
tcactacaggaaacccccaccaaggcagaaacctccaagaatcaggaagatgatgggatg
tataaaacagaggatcatgatgatatccagtttgaaccagtggtccagattcctgagaag
gtggaccttgtaactggtgaggaagatgaacaggttctgtactcgcagcgcgtcaaactc
ttcagatttgacaccgccaccagtcagtggaaagaacgtggtgtgggaactctcaaattc
ctaaagaatgacaccaacgggcgactaagggtactgatgagacgagaacaagttctgaag
gtttgtgccaaccactggatcaccaccaccatgaaccttaagcccctggcaggttcagac
aaagcatggatttggatggccaatgacttctctgatggagacgctaagcttgaacagctg
gctgccaaatttaaaactacagagctcgctgaagagtttaagcagaagtttgaagagtgc
cagcggcttctcttagatattcccctgcaaaccccccacaaactggtagacactggcaga
acagcacacctcattaagaaagcggaggaaatgaagtccggtttgaaagacttgaaattg
tttttgacagatgacaaaacgaagatcaaagatgacgacactcagggagacgttacaacc
tccggtgatgtttcaggtcttgccatcaagcctcatggtgaaaccaccggtccttccttg
gagtgggacaactatgacttaagagaaggagctatagacgatactgctgattcatcggtt
tatgctacccctgtttccagcagtcccttaagaaagaaccttttccgctttggagaatct
actgggggctttagctttagttttcagcctggcatcagcccttccaagtctcctgcaaaa
ctcaacctgagcagagtctcagtgggtacagatgaggagcaggataacactcaggacgaa
gaacgggatggtcagtactttgaacctgtggtccctttgcctgatttggttgagatctct
acaggagaggagaatgagcaggtggttttcagctacagagccaaactgtatcgctacgac
aaagaagtgaaacaatggaaagaaaggggcatcggagacttaaaagtcttacagaattac
agcactaaacgagtcaggctgatcatgaggagagaccaggtactgaagatctgttctaac
cactggatcacggagatgatgaagctggaacccatgaaggggaccgagaaggcctgggtc
tggagcgccttggactttgcagaggaaggagaaggtaaaatggagcagctggctgtgagg
ttcaaactgcaggaaacggcgaacacgtttaaacaggtctttgaagaggccaaggtggca
caagagaagggggaactgatgactcctgtgacgttacgaactgctgcaccacaagacagc
gcagcagcagcacctgaaagcacggccaccgctgtttgtggggcagcagcaatcgctgtt
ctagaggaaacgaccagagaacgatcagagccaccttctgatgttggacccagtgcagca
ggatctccgagcccaattaatcctttaaaggctgtagtgtcgccccccaagtttgtcttt
ggcaccgatagcctccagaagatttttgggactcaaagaactctctcagaaactccaaca
tctgcatcaggtttgaaaaccgcagaggctgaaagttcagtaaagcacacatctgctgct
cctgcattcaagatgagcacagggctggattttaggcttttcaaagataacccaatggct
ttttggaccaacacatccaccggccaatttgaaaccccagccccccttcaggcagcagga
ggcagcccggggtcagatgagagctctgatgtggagattgtttatgtcaaggagcccact
gctgaacaggcagctttagccagaaagctcctgctgcctctcaccttcttctgctacaag
aacgagccaggctacaccagcaacgatgaaacagatgatgaggactatgagtcggcagtg
agagccttgaatggaaaactgtaccctgatcctcatgaggctgcagcttgtagtgaggtt
gtttcctcgcacgaagcttgtgctctgctctcagagtcagactgtcaggttgtgtgggag
aagaaaccaacaccagaggaggaggagaaggcaaaaagtctccagcttccacccacgttc
ttctgtggcctgagcaccatggacagtgaccctgacggtgacaagcctgaagactttgag
acggaggtctgcaaagcacaccaagacctggttgctcagttaaaaggagctgaaccggac
tctagcagtcctgcaagcccctcagaagaaccgacctcagccccgtcatccagcagtgcg
gaggcttcaggtatcaggtctacatcagatgaacaaacctcagacaagccagcagagact
ctgagtgaaactcccagcagcagtttccccatcgacctgtcaactaagaagagtccagaa
ccgaagactaaaacggagacggacgctgctgcttcatctactacaacaaccgggcaagac
tcttctgcctttggcttcagttctcttggaggattttcttttgctgacttggctaaaaac
acggaggggtttacatttggaacacaagatgataatttctcgtgggtaaatgctggtgca
gtggtttttggagcttctgggtcctctgaggctaaaagcgatgccgacaaggagggaagt
gatgaagaggaagctcctaaaaacgtggacattcactttgagcctattgtttctctacct
gaggtggagacaaagtctggagaggaggacgaggaaatcctgtttaagaagcgagccaag
ctgtaccgatgggaccgcgaccttgaccaatggaaggaacgcggcacaggcgacatcaag
atcctcttccacccaaccaaacatttttatcgaatcctgatgagaagagaccaggtcatg
aaggtttgtgccaaccacaccatctccccgtccatgaagattaaacccatgaatgccatg
gatagtgcactggtctggaccgccacagactactcagatggtgaaggtattgtggagcag
ctggcagccaagttcaaaactccagaaatcgctgaatccttcaagaaaaccttctgtgaa
tgtcaaattcgtatgggccaaaccagcgaggacggttcaggtgtcttgtcgcagatgtcc
agagtccaagagcactctaaagagactaaccctcgggtgttcctcacagtggctgctgac
ggccagcctctgggcaccatcactgtagagcttttctctaacgttgtccccaaaactgca
gagaacttcagggctctctgcactggagagaaaggcttcggactgcgggactccatcttc
cacagggtcataccagattttatgtgtcagggcggtgacatcaccaacagtgacggcaca
ggtggcaagtccatctacggcggcatgtttgaagatgaaaactttgatgttcagcacacg
ggcccgggcatcctgtcgatggctaatcgtggacgggacaccaacaactcgcagtttttc
ataaccctgaagaaagctgaacatctggacttcaaacacgttgcgtttggctgggttcgg
gacggtatggatgtagtacagaagatgggacagctgggcacaaagggaggccctcccaca
aagaggctggtcatcacagactgtggacagctgtaa
DBGET
integrated database retrieval system
