Nematolebias whitei (Rio pearlfish): 119419601
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Entry
119419601 CDS
T08042
Symbol
nphp1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119419601 (nphp1)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
119419601 (nphp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
NOA36
DUF2492
ANAPC15
RXT2_N
Motif
Other DBs
NCBI-GeneID:
119419601
NCBI-ProteinID:
XP_037542884
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All DBs
Position
1:67467381..67476356
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AA seq
678 aa
AA seq
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MALKRLQLVQREVDVAEGQVDRLMKDVNNKYGSDEQHFQKCQELQISAEKTLKTLQKLGK
VELAPVQDRMRYDQKKQQEERRLKNILERLNTLSLELSPPGPSTAAHIVSKDDSEDDVDG
DSNKDSNDDDTDDEDEDRAVQLPCHSQLYVVLSNFKGEQEGDLSIQRGEVLRIIKKASDG
WWLAQDTKGNRGVVPKTFLKIGSGVDDEDEEVTEDDDDDESEESDEEEEEDEVEEKLTDD
PDKDRVFNWSTVRKALTQIDTTDVLSAMGAIPSGFRPSTLSKLLEEDVKFRASHYIKPDL
SQSQLSFKDLLLVPDSGRVRSRQVRTCVCFTLWSCRMIPTPGVGVQVLSRHIRLCAFDGA
QALSNIHTVRASYNPKNPKTWTFSPMVTGVLPTLLDGDCFLRCDSSSPNLGILFELGVTF
LRNSTGERGELSCGWAFLKLTDDTGNPIPNKTYELQVNGGTPYEKDVFVEASAGRKCEGG
VFQQMLQGKRQPKLNVKLKSTNSRTRSQLSLLPDTLLYCVNCVHMLVLHRQLLADTLLID
RPTMQNADPISSPILSTFPVLVDHTDLLDALRSAWLEADANMSRAQKRDLTYLKQEFSKV
YMSVYFLLHSPSLPCYRWADPPSEEERARVIYAALEDLKTYQHTASQSGGAEIFLDSTHS
HLGFDVQELTFDLLSATQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcacttaaaaggttacaacttgtccaaagggaagtggacgtagccgaaggacaggtt
gacagactgatgaaggatgtaaacaataaatatggatccgatgaacagcattttcaaaaa
tgccaggaactgcagatatcagcagagaagactctaaagacactacagaagttaggaaag
gttgagttggctccagtgcaggataggatgagatacgatcagaagaaacagcaagaagag
aggcgactgaaaaacatcctggagcgtctgaacacgctctctctggagctttcaccacca
ggccccagcactgcagcacacatagtttcaaaagatgacagtgaagatgatgttgatgga
gacagtaacaaagacagtaacgatgatgacacagatgatgaagatgaggacagagctgta
caactgccatgtcattcacagctctatgtggtcctcagcaatttcaaaggagaacaagaa
ggagatctttctattcagaggggagaggtgttgaggatcatcaagaaggcatcagatgga
tggtggttggctcaggacaccaaaggcaacagaggagtagttccaaaaactttcttaaag
atcggctctggggttgatgatgaggacgaagaggtcacagaggatgatgatgatgatgaa
agcgaggagtcagatgaggaggaagaagaagatgaagttgaggagaagcttactgatgat
ccagacaaagacagagtttttaattggtccactgtcagaaaggctctgactcagattgac
acaacagatgtgttgtcagcgatgggagctataccttctggattcagaccatcaactctc
agtaaactgctggaggaagatgttaaattcagagcaagtcactatattaaacctgacctc
agccaatcacagctctccttcaaagacctcttattggtcccagactctggcagggtccgg
tcccgtcaggtcaggacttgtgtttgcttcactttgtggagctgcaggatgattcccact
cctggagttggagttcaagtcctaagcagacacatccgtctctgtgcctttgacggagct
caggcgctgagtaacattcacacagtgagagcatcttataacccaaaaaacccgaagacg
tggaccttctcaccaatggtgactggcgtcctgcccaccctccttgatggtgattgtttc
ctacgctgtgattcttcgtctcctaaccttggaattctttttgagcttggagtcaccttt
ttacgaaactccacaggcgagaggggagagctgagttgtggctgggccttcctgaaactg
actgatgacactggaaatccaatcccaaacaagacatacgagctgcaggtgaacggtggc
actccttatgagaaggacgtctttgtggaggcatcagctggtagaaaatgtgaggggggt
gttttccaacagatgcttcagggcaagcggcaacccaaactgaacgtgaagctgaaatca
actaacagccgaacccgttcgcagctcagtctccttccagacactctgctgtactgtgtg
aactgtgtccacatgctggttctgcaccgacagctgctggctgacaccctgctgatcgac
aggcccaccatgcagaatgcagatcctataagcagcccgatactctcaacgtttcctgtg
ctggtggaccacacagacctgctggatgctctcaggagtgcatggctggaggcagacgct
aacatgagcagagcacagaagagagacttgacgtatctgaagcaggagtttagtaaagtc
tacatgtctgtgtatttcctgcttcactcaccttcgctgccctgttatcgctgggcggac
ccgccctctgaggaagagcgggccagagtcatctatgctgccctggaggatctcaaaaca
taccaacacaccgccagccaatcaggaggcgcggagatctttttggattccactcattca
catcttggttttgatgtccaagagttgacatttgatctcctcagtgctacacagtga
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