Nematolebias whitei (Rio pearlfish): 119419637
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Entry
119419637 CDS
T08042
Symbol
gpc6b
Name
(RefSeq) glypican-6b
KO
K08112
glypican 6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119419637 (gpc6b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
119419637 (gpc6b)
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119419637 (gpc6b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
Others
119419637 (gpc6b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
DUF5856
Fz
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
119419637
NCBI-ProteinID:
XP_037542922
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Position
13:complement(22465340..22593562)
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AA seq
553 aa
AA seq
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MLRLETILCTFSVLSAAAGADLQARNCSEVREVCVRRGFSFTHVPQQEIPGEHLRVCPQG
NTCCTQEMEDKFGQQSKQDFENLLDETSHALRTTFVSRHKRFDEFFLELLENTERSLNEM
FVRTYGKPYMQNAEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVAQRVSKVSSTPA
CIKALTKMLYCPFCQGMLEVKPCKNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMDPIDVKISEAIMNMQDNSAQVSYRVFQGCGQPKPAGITRSTRGVSDVFNAR
FRPYSPEEPPTTAAGTSLDRLVVDIKEKLKLFKKFWSDLPEAMCVEDRVTAANASEEECW
NGHTKGRYFPEVQKDGLTNQVNNPEVAVDITRPDTFIRQQIMALRVMTNKLKSAYNGNDI
YFQDSSDEGSGSGSGSGCTEACPTGTSGAATEIPVVKADRSGPVDDSALLCAPSLALPTT
LALLALTLHLQLR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctcagactggagaccatcctctgcactttctccgtgctgtcagcggcggcgggggca
gatctgcaagcgcggaactgcagcgaggtgagggaggtttgcgtcaggagaggcttcagc
ttcacgcatgttcctcagcaggagatcccaggggaacatctgcgtgtatgtcctcaggga
aacacatgttgcacccaagaaatggaagacaaatttggccaacagagtaaacaggacttt
gagaatctgcttgatgaaacaagtcatgcactgcgaaccaccttcgtctccagacataaa
cgatttgatgaattcttcctggagctgctggagaacacagagaggtccctgaatgagatg
tttgtgaggacttacggcaagccttacatgcagaatgcggaggtctttgagaacctcttc
gctgagctgaagcgctattacacaggagggaacgttaacctggaggaaatgcttaatgac
ttttggtctcggctgctggagcgcatgttcacactgctcaactcgcagtatgtcatcaca
gaggactatctggagtgtatcagtaagtacaccgaccagctcaagccctttggagacgtg
cccaggaagctcaaggctcaggttacccgtgcattcatcgctgcacgcacattcgtccaa
ggactctctgttggccgggaagtggcccagagagtgtctaaggtaagcagcactcctgct
tgcataaaagcgctgacaaagatgctctactgccctttttgtcagggcatgttagaagta
aaaccctgcaaaaattactgccttaatgtgatgaagggctgcctggccaatcaagcagat
ctggacccagagtggaaccagtacattgatgccatgctgcttgtagcacagaggctcgaa
gggcctttcaacattgagtctgtcatggaccctattgatgtcaagatatcggaggccatc
atgaatatgcaagataacagtgcccaggtctcctacagggtttttcaaggctgtggccag
cccaaacctgcaggaatcacgaggtccactcgtggtgtatcggatgtgttcaacgcccgc
ttcaggccctacagcccagaggagccacccaccactgcagctggcacgagcttagacaga
ctggttgttgacataaaggaaaaacttaagctgttcaagaagttttggtccgacctgccc
gaggcgatgtgtgtggaggacagagtgacggctgcaaatgccagcgaggaggagtgctgg
aacggacacaccaagggcaggtacttccctgaagtccagaaggacggccttaccaaccag
gtgaacaaccctgaggtggcggtcgacatcacacgtccagacaccttcatccgtcagcag
atcatggctctgcgggtgatgaccaacaagttgaaaagcgcctacaatggcaatgacatc
tactttcaagactcaagcgatgaaggaagtggctcgggcagtggaagcggctgcacagag
gcctgtcctacaggcacgtccggtgctgccactgagatcccagtggtgaaagctgaccgg
agcgggcctgtggatgactccgccctgctttgtgcaccctctctagccctaccaaccacg
ctggcgctcttagctctaactctgcacctgcaattgagataa
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