Nematolebias whitei (Rio pearlfish): 119419638
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Entry
119419638 CDS
T08042
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119419638
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Protocadherins
119419638
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119419638
NCBI-ProteinID:
XP_037542923
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Position
13:complement(22779324..22796123)
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AA seq
1091 aa
AA seq
DB search
MRLSVPIFFLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGAMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYSTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
LEIPENSPAGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNLPLISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRETKDEYNVTIVA
RDNGIPSLNNTRSFTVKILDENDNAPRFTKTLYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGDVSVYTFVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSSVRVNILDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVTTVKAVDHDHGESGHLTY
EIIEGNDDHLFEMDPVGGEVRIAHALWEEIAPVVELVVKVTDHGKPPLSAVAKLIIKVNT
EAAAGGGSSTSGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKESGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTSNSLTVPRSGCHSSFAGLSSDTPANRMSVIQTENFSSEPNYSGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKAAAVNGQSFEKE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
NSRKTLTTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSSTPLDLANQE
SKEERNGASDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGS
DCALDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccattttctttcttctctgggttaaagccctgacattgaaaaat
cttaattattctgtcccagaggagcaaggacctggaactgttataggtaatattgcaaaa
gatgctgggtatggagcgatggagagagggaagaaatcaaacttcagagtgctggagaat
tcggcaccgcatctggtggatgttgaccctgagagtggactaattttcaccaaacaaagg
attgacagggagacgttgtgcagacgcaacccaaagtgccagctctccatggaagtgttt
gccaatgacaaggagatttgcatgatcaagattgacatacaggacataaatgacaactcg
cccagttttccttcagatcatgtgaatattgatatttcagaaaacgcagctgctgggaca
cgtttccctctgactattgcacatgattcagattctggggaaaatgggataaaaacgtat
caggtgacaagagatgattacagtaccttctctttggatttgaaagtgagaggtgacggg
actatatacccagagctggtggttcagagacctctggatagagaggatcagagccatcac
accctgcttctcactgcaatcgatggtggggagtatccacgatcaggctcaatgcagatc
aacgtcagagtgactgattcgaatgacaatagcccggtttttgaaaaatcctcctatgtg
ctagagattcctgagaattcacctgctggaaaagttcttatagacctgaatgccactgat
caagatgagggaagcaatgggcaggttgtttattcttttactggatacgcatctgagcga
atacaagatttgttctctatagatccaaatactggtgtcatcaaggtccagggagaaata
gactttgaggagaaccccatcattgagtttgatgtgcaggcaaaagatcttggacccaat
ccgataccagggcactgtaaaattactgtcaaagtgctcgacaagaatgataacttaccg
cttataagttttgtctctgtccggcaaggagccatcagtgaggcagctcctccagagtcc
gtcatagctctggtcagagtgacggataaagactcaggccgtaatggtcagcttcaatgc
cgggtgctggggaatgtcccctttagactgcaggaaaacaatgataatttttacactctg
ctcacagatagacctctggacagggagacaaaagatgaatacaatgttacaattgttgca
agagataatgggatcccttctctgaacaacacaagatcttttactgtgaaaatcttagat
gagaatgacaatgcgccacgctttacaaagacgttatatgttttacaggtgcctgaaaac
aacatcccaggtgaatacttgggctcagttttggctcacgatccagatgtgggtcgaaat
ggaacagtgtcatactccatactgccttcccacataggagatgtgtcagtgtacaccttt
gtgtctgttaatcccaccaatggggccatttatgcttcacgctcttttaattatgaacaa
acaaaatcctttgagttcaaagttcaggctaaagatggtggctctccccacatggagagc
acctccagtgtcagggtaaacattcttgatgtcaatgacaatcttccagttatcatttta
cctttactgcaaaatgatacagctgaaatcccagtgcctagaaatgtgggtattggatac
atagtcactacagtgaaagcagtggaccatgaccatggagaaagtggacatttaacctac
gagatcatagaggggaatgacgaccacctgtttgagatggatccagtgggaggagaggtc
agaattgcacatgctctttgggaggagattgccccggtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgctgtggctaagctcatcattaaggtgaacaca
gaagcagcagcaggagggggttccagcacaagcggggaacagcagcactgggatgtgtcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagccgtcatgaccgcc
atcgctgtcaagtccaagcatcaagataaggagtctgggaattataactgccgcatggct
gagtactccaatcctccagtgggaaaagggaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggaaagagattcggcaagccggatgaacgtggtgagc
agtccatcactgatcacctcaccaatctgttttgactaccagagccccctgccactcacg
ctgcccaggtcggaagtcatgtacctgaaaaccacctcaaacagtctgactgttcctagg
tcaggatgccactccagcttcgcaggtctcagctcagatactccagcgaataggatgtca
gtgatacagacagaaaatttttcctcagagcccaattattctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctgagagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacatct
gccagggaggccctcaagatgaaagccgcagcagttaatggccagtcttttgagaaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgcagataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
aacagcagaaaaactctgaccacgtttggaaaagaacagcgggacagtacaatccttgtg
gccaatgtcaaaccttacttaaaatcgcaacgtgcgctaagtccaccgctacaagagagt
ccatctgcatctagcagtcccaccaagagcagcacgcccctggacttggccaaccaagag
tccaaagaagagcggaacggggcgtcggacagcagtgcctacggccctccagatggccag
tgctccccgctgcacacggagctggaggagccctcctacctgacctgtgagctcaggccc
aagtctctgtcaagcagtctcattcacagctctgtcatcagtcaggagtgcggggggtcg
gattgcgctctcgacccgagggactcgggtaactga
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