Nematolebias whitei (Rio pearlfish): 119419673
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Entry
119419673 CDS
T08042
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119419673 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119419673 (u2af1)
Spliceosome [BR:
nwh03041
]
Complex A
U2 snRNP components
U2 related factors
119419673 (u2af1)
Complex B
119419673 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
IL4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119419673
NCBI-ProteinID:
XP_037542968
LinkDB
All DBs
Position
13:complement(25725122..25729509)
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AA seq
227 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNNTQ
SLDGLTCTVSDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRNE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRDRDRGRGGGRDHDRRRPRDRERSGRF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacctcgcatctattttcgggacagagaaagataaagtcaattgctctttt
tattttaaaattggtgcctgtcgacatggtgaccgctgctccagattacacaacaagcca
acatttagccagacgattgccctgctgaacatttaccggaaccctcagaacaacactcag
tctctggacggtctgacctgtaccgtcagtgacatggagatgcaggagcactacgatgaa
ttttttgaggaagtcttcacagagatggaagaaaagtacggagaggtggaggaaatgaac
gtctgtgacaacctcggggaccacctggtgggaaatgtttacgtgaagtttcgtaatgaa
gaagatgccgagaaggctgtgatagatttgaataatcgctggtttaatggacaacccatc
cacgctgagctgtctcctgttacagacttcagagaggcctgctgtcgccagtatgagatg
ggggaatgcacccgtggaggcttctgtaacttcatgcatctgaaacccatttcacgtgaa
ctgaggagagagctgtacgggcgtcgcaggaagggccgccacaggtctcggtcccgatca
agagacagagacagaggccgagggggcggccgcgaccacgacaggcgtcgtcccagagac
agagagcgttcgggacgattctga
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integrated database retrieval system
