Nematolebias whitei (Rio pearlfish): 119419695
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Entry
119419695 CDS
T08042
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119419695 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119419695 (usp9)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119419695 (usp9)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119419695 (usp9)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119419695 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
119419695
NCBI-ProteinID:
XP_037542995
LinkDB
All DBs
Position
13:32792260..32882982
Genome browser
AA seq
2593 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDPQSQPPLPQNQTSPPNSSNENSPVSPPDEQGHGDGPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGALNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTTRSPHVFYRHD
LINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDPQIVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLIVRFPNQGRQVD
DLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPADDRKLIGQLNLKDKTL
ITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQIADLGCSLNMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHAKLGENSLSPSLDSRF
FGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPSAD
METRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNTEGNIPVSPINQATHDQALVLQN
ALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGTVQL
VFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPTALDTLSKEKAWQTFI
IDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYF
TLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRIGETGVEETILEGHLGVTKE
LLAFQTPEKKYYIGSEKGGANLIKELIDDFIFPASNVYLQYMKSGEFPTEQAIPVCSSPA
SINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLPPVGPRPNKGFVGLKN
AGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQENETNVDPRDEVFSYH
HQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLRE
QHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGCPHRYECEESFTTLNV
DIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDY
DWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQMIQQNELSEATPPGSSK
YRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDEEEMKNQCFG
GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVKYISELSISSTKPHQV
KMPNVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIA
MISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRYWFAHNVLFAYPNRFS
EYLLECPSAEVRGALAKLIVFIAHFSLQDGPCPSPTASPGPSAQGCDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDPNLTAPVMPVQQLVAEILFV
RTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKSHYQKRAYQCIKCMVALFSNCSVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDTSLYPHSPGTTQFQQN
NHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTSGLSTTPGSGSRAPENWEGTEEVAP
PPTSTPAPAPPKE
NT seq
7782 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagccagggccaggcacct
gatcctcaaagccaacccccactgccacagaatcagacatcacctcctaactcatccaat
gagaactctccagtgagcccacctgatgagcagggccacggggatgggccccctcagctg
gaagaggaagagcctgcttttcctcacactgacctagccaagcttgatgacatgatcaac
aggcctcgatgggttgttccagttttgccaaaaggagagttagaagtcctcttggaagct
gctatagatctaagtaaaaaagggctggatgtgaaatgtgaggcatgtcagaggtttttc
cgggatggtttaactatttccttcacaaaaattctgacagatgaggcagtcagcggctgg
aagtttgagatacataggtgcatcattaacaacacacatcggttgattgaactgtgtgtg
gccaagctttctcaggactggtttccactactggagctgctggccatggccaccaacccc
cactgcaagttccacatctacaacggcacacggccctctgagaccgtacctgctggggca
cagcttgctgacgacgagctctacgctcggccaccggacccacgatcccctaagggctgg
ctggttgatttaataaacaaatttggcgcgttaaacggatttcaaattttgcacgatcgc
ttcatgagcggccaagcactgaacgtccaaatcatcgctgctcttatcaaaccttttggc
caatgttatgagttcctcacattgcacacggtaaagaaatacttccttccagtcatcgag
atggtccctcagtttctagagaatctcacagatgaggagctaaagaaggaggccaagaat
gaagccaaaaatgatgcactgtccatgataatcaagtctctgaagaatctggcttcccgt
gtaccagggcaagaggagactgtgaagaatttagagatttttaggttaaaaatgattctt
aggttattacaaatttcttcttttaacggcaaaatgaatgcactaaatgaagttaacaag
gtgatctccagtgtgtcctactacactcatcgacataacccagaagaggaggagtggctt
actgcagaacgcatggcggaatggatccagcagaatcacatcctgtctattgtcctgaga
gacagtttgcatcagccgcagtatgtggagaaacttgagaagatcctcagatttgttata
aaagagaaagctctgaccatgcaagatttggacaacatctgggctgcacaggctggtaag
catgaggccattgtgaagaatgttcatgaccttttggctaaattggcatgggacttctca
cccgagcagcttgatcatctttttgactgcttcaaggcaagctggaccaacgccagcaaa
aagcagcgtgaaaaactacttgaacttattcggcgcttggctgaagatgacaaggacggt
gtgatggcccacaaggtcctcaacctgctgtggaacctggcccacagtgatgatgtacct
gtggacatcatggaccaagctcttagtgctcacattaagatacttgactacagttgctca
caggacagagatacgcagaagattcagtggatagatcgcttcatagaagaactacgaact
aatgacaaatgggtgatccctgccttaaaacaaatcagggaaatttgtagcctctttgga
gaagctcctcaaaacctcagtcaaaccacgagaagtcctcatgtattttaccgccatgac
ctgatcaaccagttgcagcataaccatgctttggtcacactggtggcagagaatctctca
gcctacatggagaccatgaggcaattatccaaagaagaacaagcagaatttgatccacag
atcgtccgaccaggaagccgctacagtcatgtccaggaagtacaggaacgactcaacttt
ctgaggtttctgttaaaagatggccagttgtggctgtgtgcccctcaagcaaagcagatc
tggaagtgtctggctgaaaatgcagtgtttctgtgtgaccgtgaggcctgcttcaagtgg
tactcaaagctgatgggtgatgagccagacctagatccagacatcaataaggacttcttt
gagaacaatgttttacagttggacccatctctgctgacagaaaatggcatgaagtgcttt
gagaggttctttaaagcagtcaactgcagggaagggaagctagtagcaaaacgcagagcc
tacatgatggatgacctggaattaatcggcttggactatctatggagggttgtgattcaa
ggaagtgatgacattgctaaccgagccatagacctactaaaagagatctacaccaacctt
ggaccaaaactacaagtcaaccaggttgagattcatgaagattttatccagtcctgtttt
gaccgtctgaaggcgtcctatgacactctgtgtgttctggacggagataaagacagcatt
aattgtgcacggcaggaggccatccgtatggtccgtgtgcttacagtactcaaggagtac
ataaatgagtgtgatagtgactaccacgaggagaggactatacttccaatgtcgagagct
ttccggggaaagcacatcacactgattgtacgttttcctaaccaaggtcgtcaggtggac
gatttagacatttggtcacacaccaatgacactattggctcagttcgacgtggcatcctg
aacagaataaaagccaatgctgcacatacaaagatcgagctatttattggtggagaggtt
gtggatccagctgatgacaggaagctgattggacagctcaatttgaaggacaaaacgctg
atcacggccaagctgacccaggtgagtgccaacatgccctcaagtccagacagctcatct
gactcatccactggctcccctggtaaccatggaaaccactacagcgatgggcctaaccct
gaagtagagagctgccttcctggtgtgattatgtcgctgcatccgcgctacatctccttc
ctgtggcagatcgctgacttgggctgcagcctcaacatgcctcagcttagagatggcgct
cgagttctcatgaaacttatgcctccagataacaccactgtggagaatctgagagctgtg
tgtctggatcatgctaagcttggcgagaacagtctgagtccttcactggactctcgtttc
ttcggcccttcaccttcacaagtgctctaccttattgaggttgtgtatgctttgctgatg
ccagccagtgccactctgggcgaggatgccagtgattttcagtacaacttcctaaagagc
ggtggtctgcccttggttttgagcatgctcactaggaacaactttcttccttcagcagac
atggaaacacgccgaggggcttacctcaatgctctgaagattgctaagctccttctgact
gcagttggtttcgggcatgtaaaagctgtggctgaggcttgtcagcccaacactgagggg
aatattcccgtctctccaataaaccaggcaactcatgaccaggcgctggttcttcagaac
gccctgcagaacattcccaaccctgcctctgagtgcatgctacgtaatgtagctattcgc
ctggctcagcagatttctgatgagaatttcttccaggcgtcaaagtacatcccagacatt
tgtgtgatccgagcagtgcagaaaattgtgtgggcatcaggctgtggtaccgtgcagctt
gtgttcagttccaatgaggaaatcagcaagatctacgagaagacaaatgcagccaaggag
ccagatggtgaggatgagcaggtatgctgcgaggccttggaagtgatgactctgtgtttt
gccctcatgcccacggcgcttgacacgctcagtaaggagaaggcttggcagacctttatc
atagacttgctgctacactgccacagcaaatccgtgcgtcagatggcccaggagcagttt
ttcctcatggcaacaaggtgctgtatgggacatcgacccctactgttttttatcaccctc
cttttcacagtgctcgggagcacagccaaagagcgagccaaacatgctggggactacttc
actctgctccgacatctactgaactatgcgtacaacagtaacatcaatgtgccgaacgct
gaggtgctgctcaacaatgagattgactggctgaaacgaatacgggatgaggttaagaga
attggagaaactggtgtggaggaaaccatcctggaaggtcaccttggggtcaccaaagag
cttctagccttccagacaccagaaaagaaatattacatcggctctgaaaagggaggagcg
aaccttattaaggagcttattgatgacttcatcttcccagcatcaaatgtttacctgcag
tacatgaaaagtggagagttccccacagagcaggccattccagtgtgcagctcacctgca
tccatcaacgctggctttgagctcctggtggcgctggctgtgggatgtgttcgcaacctc
aaacagatcgttgacactttgactgacatgtactacctgggctgtgagacattaacagag
tgggagtatttgcctccagtggggccacgacccaacaaaggttttgtaggtctgaagaat
gccggtgctacctgttatatgaactctgtcattcagcagctctacatgatccctcccatt
cgcaacggcattttagctattgaggggacgggcaccgacgtggatgatgatatgtcgggg
gatgagaagcaggaaaatgagactaatgtagatccccgtgatgaagtttttagctaccac
caccagtttgatgataaaccctcaagtaagtctgaggacaggaaggagtacaacattggt
gtgctgcgtcacctacaagtcatctttggccacctggctgcatccaggctgcagtactat
gtcccaagaggattctggaagcaattcaggttatggggtgagccagtaaatctgagggaa
cagcacgatgctttggaatttttcaactcgctggtggacagtttggatgaagctctcaaa
gctctgggtcaccctcccatgctcagcaaagtgctaggagggtccttcgcagaccaaaag
atttgtcaaggatgcccccataggtacgagtgtgaggaatcattcacaacactcaacgta
gacatcaggaaccaccaaaacttgttggactctatggagcaatatgttaaaggagatctt
ctagaaggagcaaatgcttaccattgtgagaagtgtaacaagaaggtggacacagtgaag
cgtttgctgatcaagaaactgccgcctgtcctcgctatccagctaaagcgctttgactat
gactgggaaagggagtgtgccattaagttcaacgactacttcgagtttcccagggagctg
gacatggagccgtacacagtagcaggtgtggcgaagcttgagggtgacgacgtgaaccca
gagaaccagatgatccaacagaatgagctgtctgaagccacaccacctggcagctccaag
tatcgtctggttggagtactggttcactctggccaggccagtggcggacactactattcc
tatataatccagagaaatggaggtgacggggagaagaaccgctggtataagtttgatgac
ggtgatgtgactgagtgcaagatggatgatgaggaggagatgaagaatcagtgctttggg
ggagagtacatgggggaagtatttgaccatatgatgaagaggatgtcgtatcggaggcag
aagcgctggtggaatgcttatatcctgttctacgagcgcatggactcactggacaaggac
agcgaacttgttaaatatatttctgagttgtccatttcctccaccaagccacatcaagtc
aagatgcctaatgtcatcgagtgtagcgttcgcaagcagaacgtccagttcatgcacaac
cggatgcagtacagcctggaatatttccagttcattaagaaacttctgacctgtaacagt
gtctatttaaatccccctccaggacaagaccaccttctgccagaggcagaggagattgcc
atgataagcgctcagctggctgctcggttcctcttcagcacaggttttcacaccaaaaag
gtcgtacgaggtcctgccagcgactggtatgacgctctctgcatcctgctgagacacagt
aagaatgtacgctactggtttgcacacaacgttctgttcgcttaccctaatcggttctct
gagtatctcctcgagtgcccaagtgctgaggtccgtggagcgcttgccaagcttatagtc
ttcatcgctcacttctccctgcaagatggtccatgtccctcccccactgcctcgcctgga
ccctcagctcagggctgtgataatctgagccttagtgaccacttgttgagagctgtactg
aacctgctcaggagagaggtttctgaacatggccggcacttgcaacagtactttaacctc
tttgtcatgtacgccaatttgggcctggcagagaagactcagctgctgaagctaaatgtt
cctgctactttcatgttggtagctctggacgagggtcctggtcctcccattaagtaccaa
tatgctgagctgggcaagctttacactgtggtctcccagctggtgcgctgctgtgatgtg
tcctcacgcatgcagtcctccatcaatggtaaccctccccttcctaacccgtacggggac
ccaaatctgacggctccagtcatgcctgtacagcagctggtggcagagatcctgtttgtg
aggacaagctacgtaaaaaagatcattgaggactgcagcaactcagaggagactgtgaag
ctgcttcgattctgctgctgggagaatcctcagttctcctccactgtactcagtgaactg
ctctggcaggtggcgtattcctacacctatgagctgaggccttatctggacttgctgcta
cagatcctgcttatcgaggactcctggcaaacacacaggatccacaatgtgcttaaaggc
attcctgatgacagagatgggctgtttgacaccatccagcgctccaagagtcactaccag
aaacgggcctatcagtgcatcaagtgcatggtggccctctttagcaactgctctgtggct
taccagatcctgcagagtaacggtgacttgaagcgaaagtggacgtgggctgtagagtgg
ttaggggatgagctggagaggaggccgtacacaggaaacccacagtacacgtacaataac
tggtcccctcctgttcagagcaatgagacctctaatggatacttcctggagcgctcacac
agtgctcgcatgacgctggctaaggcatgtgaactctgtcctgaagagctcaagtgtact
cagggaagcccagggaaggagccagatgaacaggaagcgcctgatgatcaagactcctcc
ccccctgaggacacgtctctttacccccattctcctggaaccacccagtttcagcagaac
aaccacccccacgggcagccgtacactgggcctgctgctcagcacatgaacaacccccag
cgtcctggcccggcttctgctccaactccaggcccgacccagacctcgggtctcagtacc
actcctggctcaggctcgcgagcaccagagaactgggagggcactgaggaggttgcccca
cccccaacctccaccccagcgcccgccccacctaaggaataa
DBGET
integrated database retrieval system
