Nematolebias whitei (Rio pearlfish): 119419762
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Entry
119419762 CDS
T08042
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119419762 (lcmt2)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
119419762 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
119419762 (lcmt2)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119419762 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_3
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
119419762
NCBI-ProteinID:
XP_037543073
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All DBs
Position
13:complement(2993792..3002030)
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AA seq
678 aa
AA seq
DB search
MPRTKKSKQKKSSDSAVQGTNDSSVVSKCSAAAQGYFKDPFLQHFVAKVTRRAPLINRGY
YVRWRAVDHCVRTFLQVTAKCPNRQILSLGAGFDSLYFRLRADGALNDAVVFEVDFPDVA
RRKAALIASNINLRGMLDSCLPSLTGPVYVSSSHHLLLGLDVRDESQLEDALGAAGLDWT
APTLILSEVVLTYMETQWSDAVISWAAERLPQSLFVMYEQIHPHDPFGRIMQEHFVKLSS
TLHALLQYPDTSTQRRRFLDKGWDCCVCLDMNDFYSQLVPEEERRRVESLEPFDEHEEWH
AKCSHYFILTASRGSLMQQALLPVPVSPAPPVSPSWSPAALNVRTVPVCLEGMGMASTWT
GPDQVLLTGGSGRGGRKAESRALVRGPEGWRSIAVEPSEHLGVRLHHTLTRLPAGGAVIH
GGRASPLRPVEGLFKLTFEPRLLPAAAEPTCGDALKVCVEPMICTGSPPSPRWRHTSAVV
QHRGRDFLFVFGGKNRSDSVLGDAFFLCLDRQNWTEIPVDGTAPAARHSHSACSYQGGAL
VFGGLSPRGTPLGDTALLRQTETGFLWETVDVRPPPVPRCSHCAHVVGDKLVVVGGVWWS
SEGVPGVVVIDLNTCSSREFSLDTSSVPWPLMLHSFCSELTDPSEPKLLLIGGGGNCFSF
GTHLNPQLVSVDLRPVLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggacaaagaaaagcaagcagaagaagagcagcgactcggcggtgcagggaacc
aacgacagcagtgtggtgagcaagtgttcggctgcagctcagggctacttcaaggaccct
tttctccagcactttgtggccaaggtgaccagaagagccccgctcatcaacaggggctac
tatgtgcgctggagagctgtggaccactgtgtgaggacgttccttcaggtcacagcgaaa
tgcccgaacagacagatcttgtctctgggtgcaggttttgactctctgtatttccggctg
cgtgcagatggagctctgaatgacgccgtcgtgtttgaggtggattttcctgacgtcgcg
cggcgtaaagctgctctgatagcgtctaatataaatctgagaggaatgttagactcgtgt
ctgccttcgcttacagggcctgtttacgtgtccagcagtcaccacctcctcttaggattg
gacgttagagacgagtcccagctggaggatgctctgggtgcagctgggctggactggacc
gcccccaccctgattctttccgaagtggtgctcacctacatggaaacacagtggtccgat
gccgtgatcagctgggcggcggagcgcctgccacagtctctgtttgtgatgtacgagcag
attcatcctcacgatccgtttggtcgcatcatgcaggagcattttgtgaagctgagctca
acgctgcacgccctgctgcagtacccagacacctccacacagagacgcaggttccttgac
aagggatgggactgctgtgtgtgtctggacatgaacgacttctactcgcagctggtccct
gaggaggagcgccgtcgcgtggagagcctggagccgtttgatgaacacgaggagtggcac
gccaaatgttcccactacttcatcctcacggcgtcccggggctctttgatgcagcaggct
ctacttcctgttccagtgtctccggcgccgcccgtcagcccgagctggagccctgcagct
ctgaacgtacgcacggttcctgtgtgtctggagggcatggggatggcctccacctggaca
ggacctgatcaggtgctgctgactggaggctccggtagaggaggcaggaaggccgagagc
agagcgctggtcagaggtccggagggctggaggtccatcgcagtggagccatcagaacat
ctgggagtgcgactacaccacacgttgacccgtcttcctgcgggaggagcggtgatccac
ggaggacgcgcctcgccgctccgcccagtcgaaggccttttcaagttgacctttgaaccc
cgccttctcccggctgccgcggagccgacgtgcggagacgcgctgaaggtttgcgtggag
ccgatgatctgtacaggaagtcctccgtcgccgagatggcggcacacttcggctgtggtc
caacacagaggcagggacttcctgttcgtgtttggtggaaagaaccggtcagattccgtc
ctgggcgatgccttcttcctgtgtttggaccggcagaactggactgagatcccagtagac
ggcaccgcaccagcagctcgtcactcccactcggcctgttcctatcagggaggcgcgctg
gtgttcggcgggctgagcccacgggggacgcccctgggggacaccgctctgctgaggcag
actgaaactggcttcctctgggagacggtggacgtgcggccccctcctgttcccaggtgc
tcccactgcgcccacgtggtcggtgacaagctggtcgtggtgggaggggtgtggtggagc
tcggagggggtgccaggtgtcgttgtgatcgacctgaacacctgcagcagccgggagttc
agcctggacacgagctccgtgccctggcctctgatgctccactccttctgctccgagctc
acggacccgtcggaaccaaagctgctcctgatcggaggaggggggaactgcttctccttc
gggactcatctgaaccctcagctggtctcggtggacctcagaccagttctggactga
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