Nematolebias whitei (Rio pearlfish): 119419772
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Entry
119419772 CDS
T08042
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119419772
Spliceosome [BR:
nwh03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
119419772
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Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
Motif
Other DBs
NCBI-GeneID:
119419772
NCBI-ProteinID:
XP_037543082
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Position
13:3772334..3786368
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AA seq
707 aa
AA seq
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MHGRNPFFLEPAIIIAISDGNKLTGSGGVQDELHLPLTTPLPGSELTKEPFRWDQRLFAL
VLRIPGNASVEPEPLGGVPPDDSPITPMCEVTGGRSYSVFSQRMLNQCLESLVQKIQSGV
VINFEKTGPDPPPLEDAPAEALKSGPQPWHSCHKLIYVRPNPKTGVPIGHWPIPEAFWPD
QNSPTLPPRSAHPHIRFSCVDAEPMVIDKVPFDKYELEPSPLTQYILERKSPHTCWQVFV
SNSAKYSDLGQPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDLIKVHKFKPTLKWRQSF
ENYLKTMPPYYIGSLRKALRIMGAPNLLADNMEYGLSYSVVSYLKKLSQQTKIEYDRLIA
SIGKKPPPEPGMKVRWRGGGISLAQRRDFIQQLQSLTGEAPSVPVELNPKEFQGFHLALL
NKGLKPQSFRNPYDIPRSHLLDQLSRMRRNLLNTSVCALRGHDSDQLHSVPIAQMGNYQD
FLKAAPQPLRDADPEQPKRLHTFGNPFKLDKKGMMIDEADEFVTGPQNKGKRPADNCNMP
GGGPKKRRCMSPLLRLGRAYTPPVTPLNSPRHPSDLDLNDGTPEPDLMINHLNQNHYSSD
NSSDSEVDHPSGPIDLQENHAAVEPEALLHQDEEENGQAGELLPGSDGVADGMLMEEQPP
RFLSPSALKKHIHIETTKVNNELRTLITKEIRKPGRRTYSRRVRPQL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaaggaatccatttttccttgagcctgccatcatcattgcaatcagcgatggc
aacaagttgacgggcagcggcggcgtgcaggacgagctccatctgcctctgaccaccccg
ctgccgggcagcgagctgaccaaggagccctttcgctgggaccaacgtctgtttgctctg
gtgctgcgtatccctggcaacgcttcagttgagcccgaacccctcggtggcgtcccgccc
gacgattctcccatcacacccatgtgcgaggtcactggaggacgttcctacagcgttttc
tcgcagcgcatgctgaaccagtgtctggagtctctggtgcagaagatccaaagtggagtc
gtgatcaactttgagaagaccgggcccgacccccctcctctagaggacgctccggccgag
gcactgaagtctggtccccagccttggcattcttgtcacaagctgatctatgtgcgacca
aaccctaaaaccggtgtccccatcggtcactggcccatccctgaagccttctggcccgat
cagaactctccaacacttcccccccgctcagcccacccccacatacgtttctcctgtgtg
gacgctgagcccatggtgatcgacaaggtgccctttgacaagtatgagctggagccgtcg
ccgctcacgcagtacatcctggagaggaagtcccctcacacctgctggcaggtgtttgta
agtaacagtgccaagtacagcgacctgggtcaaccttttggatacctaaaggccagcacg
gctctgaactgtgtcaacctgttcgtaatgccctacaactaccccgttcttctaccactg
ctggacgacttgatcaaagtgcacaagttcaagccgaccctgaaatggcgccagtccttt
gagaactacctgaagaccatgcctccttattacatcgggtccctgaggaaagcgctgaga
ataatgggagcaccgaacctgctggcggacaacatggagtatggactgagctacagcgtg
gtctcctacctgaagaaactcagtcagcagacgaagatcgagtacgaccgcctgattgcc
tcgatcggtaagaagccccctccagagcccggcatgaaggtccgctggcggggtggcggc
atctctttagcccagcgcagggacttcatccagcagctgcagagcctcacaggagaggcg
ccctccgtacccgtggagctcaaccccaaagagtttcaaggctttcacttggctctgctc
aacaaaggcttgaagcctcagagttttagaaatccctacgacatcccccgcagccacctg
ctcgatcagctcagccgaatgaggaggaacctgctcaacaccagcgtctgtgctctgcga
gggcacgactctgaccagctccacagcgtgccgatcgcccagatgggaaactaccaagac
ttcctgaaagctgctccccagccccttcgagacgccgaccctgaacagcccaaacgcctg
cacacgtttggaaaccccttcaaactagacaagaagggcatgatgattgacgaggcggac
gaatttgtgaccggacctcagaacaagggcaagagacctgcagataactgcaacatgcca
ggtgggggtcccaagaaacgccgctgcatgtcacctctgctgcgtctgggcagggcctac
acccccccagtaaccccgctgaacagcccccggcacccgtcggatctcgatttaaatgat
ggcacgccagaaccggacctgatgattaaccacctgaaccagaaccactacagttcagac
aacagctccgactcggaggtggatcacccctcggggcccatagacctccaggagaaccac
gccgcagtggaacctgaagccctccttcaccaggatgaggaggagaacgggcaggcaggc
gagctgctgccgggcagcgacggcgtggcagacgggatgctgatggaggagcagccgccc
cgcttcctgtccccctctgctctgaagaagcacattcacatcgagacgacgaaggtcaac
aacgagctgcggacgctcatcaccaaggagatcaggaaacctggcaggcgtacgtactcc
cgacgcgttcgaccacagctctga
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