KEGG   Nematolebias whitei (Rio pearlfish): 119420002
Entry
119420002         CDS       T08042                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03030  DNA replication
nwh03410  Base excision repair
nwh03420  Nucleotide excision repair
nwh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119420002 (rfc3)
   03410 Base excision repair
    119420002 (rfc3)
   03420 Nucleotide excision repair
    119420002 (rfc3)
   03430 Mismatch repair
    119420002 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nwh03032]
    119420002 (rfc3)
   03036 Chromosome and associated proteins [BR:nwh03036]
    119420002 (rfc3)
   03400 DNA repair and recombination proteins [BR:nwh03400]
    119420002 (rfc3)
DNA replication proteins [BR:nwh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119420002 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    119420002 (rfc3)
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    119420002 (rfc3)
DNA repair and recombination proteins [BR:nwh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119420002 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    119420002 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247
Other DBs
NCBI-GeneID: 119420002
NCBI-ProteinID: XP_037543297
LinkDB
Position
14:complement(18647416..18650991)
AA seq 356 aa
MSLWLDKYRPTSLGKVDFHKKQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRIILCSTSTSKVIEPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWEVYLRDTANAIVSQQNPQRLLEVRARLYELLIHCIPPDIIMKNLVNELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFTAKFMAMYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtggctggacaaatatcgaccaacttccctcggcaaggtcgactttcataag
aagcaagcggctcagctgaaaaacctggttcagtgtggcgactttcctcacttgttggtg
tacggtccatcaggagcagggaagaagacccgcatcatgtgtttactgagggaactgtat
ggaccaggagtggagaaacttcgcatagagcaccaaactgtcgtggctccatcaaagaag
aaaatagagattaacacaatagccagcaactatcacttggaggtcaacccaagtgatgcg
ggaaaccaggaccgtgtggtgattcaagaacttattaaaacagtggctcagtcccagcaa
atccagtcgagcacccagagagacttcaaagtggtgttgctaacagaggtggacagactc
acaaaagatgctcagcatgctttgcgtcgcacgatggagaagtatatgtctacctgccgc
atcatcctttgctcaacatccacctccaaagtcattgagccaatcaggagccgttgtctg
gcggtcagagttcctctgccaagcacagaggaggtctgcagtgtactgacatcggtgtgt
aaaaaggagggtctgctcctgccccccgaactggccaaacaaatcagtgagaaatccggg
cgcaacctccgcaaagccctcttgatgtgcgaggcctgcagagtgcagcagtatccattt
tcagccgaccaagatgttccagagacggactgggaggtctatctgagagacaccgctaat
gctatcgtcagccagcagaaccctcagaggctgttagaagttcgagctcggttgtacgag
ctgctgattcactgcattcctcctgacatcatcatgaagaatttggtaaacgagctgctg
aacaactgcgacgggcagctgaagacagaggtggctcacctggcagcgtactatgaacac
agactacagctgggcagcaaggccatctaccacctggaggctttcacagccaagttcatg
gccatgtacaagaagttcatggaagacgggctggacgccatgatgttttaa

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