Nematolebias whitei (Rio pearlfish): 119420002
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Entry
119420002 CDS
T08042
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03030
DNA replication
nwh03410
Base excision repair
nwh03420
Nucleotide excision repair
nwh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119420002 (rfc3)
03410 Base excision repair
119420002 (rfc3)
03420 Nucleotide excision repair
119420002 (rfc3)
03430 Mismatch repair
119420002 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119420002 (rfc3)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119420002 (rfc3)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119420002 (rfc3)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119420002 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
119420002 (rfc3)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119420002 (rfc3)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119420002 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
119420002 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
Motif
Other DBs
NCBI-GeneID:
119420002
NCBI-ProteinID:
XP_037543297
LinkDB
All DBs
Position
14:complement(18647416..18650991)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKVDFHKKQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRIILCSTSTSKVIEPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWEVYLRDTANAIVSQQNPQRLLEVRARLYELLIHCIPPDIIMKNLVNELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFTAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggacaaatatcgaccaacttccctcggcaaggtcgactttcataag
aagcaagcggctcagctgaaaaacctggttcagtgtggcgactttcctcacttgttggtg
tacggtccatcaggagcagggaagaagacccgcatcatgtgtttactgagggaactgtat
ggaccaggagtggagaaacttcgcatagagcaccaaactgtcgtggctccatcaaagaag
aaaatagagattaacacaatagccagcaactatcacttggaggtcaacccaagtgatgcg
ggaaaccaggaccgtgtggtgattcaagaacttattaaaacagtggctcagtcccagcaa
atccagtcgagcacccagagagacttcaaagtggtgttgctaacagaggtggacagactc
acaaaagatgctcagcatgctttgcgtcgcacgatggagaagtatatgtctacctgccgc
atcatcctttgctcaacatccacctccaaagtcattgagccaatcaggagccgttgtctg
gcggtcagagttcctctgccaagcacagaggaggtctgcagtgtactgacatcggtgtgt
aaaaaggagggtctgctcctgccccccgaactggccaaacaaatcagtgagaaatccggg
cgcaacctccgcaaagccctcttgatgtgcgaggcctgcagagtgcagcagtatccattt
tcagccgaccaagatgttccagagacggactgggaggtctatctgagagacaccgctaat
gctatcgtcagccagcagaaccctcagaggctgttagaagttcgagctcggttgtacgag
ctgctgattcactgcattcctcctgacatcatcatgaagaatttggtaaacgagctgctg
aacaactgcgacgggcagctgaagacagaggtggctcacctggcagcgtactatgaacac
agactacagctgggcagcaaggccatctaccacctggaggctttcacagccaagttcatg
gccatgtacaagaagttcatggaagacgggctggacgccatgatgttttaa
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