Nematolebias whitei (Rio pearlfish): 119420018
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Entry
119420018 CDS
T08042
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119420018 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119420018 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119420018 (vps36)
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
119420018 (vps36)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119420018 (vps36)
Exosomal proteins of colorectal cancer cells
119420018 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
119420018
NCBI-ProteinID:
XP_037543314
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Position
14:complement(20675880..20686082)
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AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQSGVRLYDGDDKSKLDVGVALLSTHRLIWRDIKNHECCMA
IPLSQIIFFEEQAAGIGKSAKIVVHLHPSAASKEPGPLQNSKFSYIKMSFKEHGQIEFYR
RLTEEMTQRRWENTPVSQPISTGAGSQTGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIATKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLLNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDSVTEKGSLTAEEFAKLLGLSVLLSKERLMLA
EKMGHLCRDDSVEGLRFYANLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggataggttttcgtggtcaaatggacttttagaaataaatgaaacattagtgatccaa
cagagcggtgtcagactgtatgatggtgatgataagtctaaactggatgttggagttgcc
ttgttaagcacccatcggctgatctggagggacattaagaatcatgagtgctgcatggcc
atccccctgtctcagatcattttctttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttgtccatctgcatccttctgctgccagtaaggaacccggtcccttacagaac
agcaagttctcctacatcaagatgtcttttaaagaacacgggcaaattgagttttacagg
agactaacagaggagatgacacagagaagatgggagaatacaccagtttcacaacccatt
tccactggagctgggtctcagacaggaaggacacgcgctgtgggaattgtcggcattgaa
aggaagatagaggagaagagaaaagaaacagacaagaatatttctgaggcctttgaggac
ctcagtaagctgatggtgaaggctaaagagatggtggagctgtccagatccatcgccacc
aagatcaaagataagcagggagacataacagaggatgagacaatacggtttaagtcctac
ctcttgagcatgggtattgctaatcccgttaccagggaaacccacggatcaggcacacat
tatcacatgcagctggccaagcagttaggagacatgctgcaggctcctctagaggagcgt
ggagggatgatggctcttacagaagtttactgtcttgtcaaccgtgcaagaggaatggag
cttttatctccagaagatttgttaaatgcctgcaaaatgtttgagtcattgaagctccca
ctgaggctgcgagtgtttgacagcggtgtcatggtggtccagctgcagtctcacagtgaa
gaggaaatgatagcctctgctttggatagtgtgacagaaaagggctctctgacagcagag
gagtttgcaaagcttctcggtctctctgttcttctttctaaagaacggttaatgctagca
gagaagatgggccacctgtgcagagatgactcagttgagggtctgagattctacgcaaac
cttttttga
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