Nematolebias whitei (Rio pearlfish): 119420031
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Entry
119420031 CDS
T08042
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119420031 (ddx52)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119420031 (ddx52)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
Helicases
119420031 (ddx52)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119420031
NCBI-ProteinID:
XP_037543329
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All DBs
Position
14:22087101..22094054
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AA seq
651 aa
AA seq
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MDTFELFRKLGAGAKFDLKRFGLDAARFKVVRSQGEKATSDCLSEIDYFGSGSANGAQRR
DEEESDRGHSTEIGKRKRKEEEIDVKRQKKTSRSSTMEVGGAAQQLSDTQGITWTSLDKT
PQTLQRDGNGKSSLKRLKHLHLEKVNQIRAKHRINVHGSDVPDPVCTFEELQSEYHLHTR
ILQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFSLPLLAHLKQPANLGF
RALIISPTRELSSQTHRELLRLSEGVGFRVHIIDKASLAAKKYGPQSNKKYDILVSTPNR
LIYLLKQDPPAVDLSSVEWLVVDEADKLFEDGKTGFREQLATIFLACSGAKVRRAFYSAT
CTQEVEQWCRLNLDSLVSVNIGHRNTAVETVEQELLFVGTESGKLVAVRDIIKKGFLPPM
LVFVQSIERAQELFHELVYEGINVDVIHAERTQQQRENVVNSFRSGKIWVLICTALLARG
IDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHRGKAITFFTENDKPLLRSIANVIKQAG
CPVPDYMTGFKKIHSKIKRRLEKKPPKRSTICTTPRFLMKEKGKAQKKQQTQKEETKPPT
AAQRQKDIKKTNRHEKKAPKGGGTKKHKGATQKMGSNSSGVKIKKKKSQKV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacaccttcgagctgtttcggaagctcggagctggagctaaatttgacttgaagaga
tttggtctcgacgccgctcgatttaaggttgtcagatctcagggagaaaaggcaacttca
gattgtctctctgagatcgactactttggctcaggctcagctaatggagcccagagacgt
gatgaggaggaaagtgaccgcggacactcgactgagattgggaagaggaagcgcaaggaa
gaagagatagatgtgaagcgccagaagaaaacgagtagaagcagcacgatggaggtggga
ggtgctgctcagcagctgagtgacactcagggcatcacttggacctccctggacaaaacc
cctcaaaccctgcaaagagacgggaatgggaagtcctcgttgaagagactgaagcatctt
catctggagaaggtgaatcaaattcgtgctaaacaccgtataaatgtgcacggcagcgac
gtgcccgaccctgtgtgcacatttgaggagctgcagtccgagtatcacctccacacacgc
attcttcagaacctcaaagatgcagggctgaactctccaacgccgatacagatgcaggcg
ataccgctcatgatgcacggtcgggagctcttggcgtgcgctcccacgggatcggggaaa
acgttggcattctcccttccgctgctcgcccacctgaagcagccagcaaatctgggcttc
agagctctgatcatctctccaaccagagaactgtctagtcagacccaccgagagctgctc
cgcctgtcagagggagtcgggtttagagttcacatcattgataaagcttccctcgctgcc
aagaaatatggcccacagtcaaacaagaaatatgatatccttgtcagcactccaaacaga
ctgatctaccttctgaagcaggaccctcctgctgttgacctcagcagtgtggagtggctg
gttgtggacgaggctgataagctgtttgaagacggtaagacgggattcagggagcagctg
gccacgatttttctcgcctgctctggtgcaaaggtgcgcagggctttctacagcgccacg
tgcacacaagaagtagaacagtggtgccggctgaacctcgacagcctggtttctgtcaac
attggacaccgaaacacggcagtggagacggtggaacaggaactgctgtttgttgggaca
gagagcggaaagcttgtggccgtgagggacatcatcaagaaaggtttcctccctcccatg
ttggtgtttgttcagtccatagagcgagcacaagagctcttccacgagttggtgtacgaa
ggcatcaacgtagacgtgatccatgccgagcgcacgcagcagcagagggaaaatgtggtg
aacagctttcgctccggtaagatttgggttctgatctgcacggctctgcttgccagagga
atcgatttcaaaggagtgaacctcgtactgaactacgacttccccaccagcgccgtggag
tacatccaccggatcggacgaactggtagagcagggcatcgggggaaggccatcactttc
ttcacagagaatgacaaaccgttgttacgcagcattgctaatgtgataaaacaagctggc
tgtcctgttccagactacatgacaggcttcaaaaagatacacagcaaaataaagcgaaga
cttgagaaaaaacctcccaagagaagcaccatttgcacaactcctcgcttcctaatgaag
gagaaaggcaaagcacagaaaaagcaacaaacgcagaaagaagaaactaaacctccaaca
gcagcacaaagacaaaaagacataaagaagacaaacaggcatgagaaaaaagcaccaaaa
ggagggggaacaaaaaaacacaaaggcgcaactcagaagatgggatcaaattcctcagga
gttaaaattaaaaagaagaagagtcagaaagtttaa
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