Nematolebias whitei (Rio pearlfish): 119420120
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Entry
119420120 CDS
T08042
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119420120 (zc3h12b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119420120 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
119420120
NCBI-ProteinID:
XP_037543425
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Position
14:36245614..36248951
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AA seq
845 aa
AA seq
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MATWSVVEKLKMEKRPCREENTDSREARHAADESENGSSSESESEEQQHRRVPVSTSGCK
RREPLAITKPHRQLCRSPCLDRPSFSQSSTVQDFRDDDTSAAPGIKLASGREYQSKMEFA
LKLGYSGEQVEVVLNKLGATALINDVLAELVRLGNKVEPELQPCSSTFTSISRSPCVKEA
VSPEVSVEEDPVEVYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITV
FVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKC
GTGPAAVKGDSSSEAKRVAPKRQSDPSIRSVACEPPEALSVVRKSETNSVPSLVSALSVP
TMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSVQYPPILVTNSHGASVTYGEQF
PKYDSVSDHGYYSLHSDFSNMSMSSMQNVDSFCSMEHEHVYQRNPSHCPESCLSHSNSDS
FSSYGDMYPSSVDSSLEESIKGQQQAPAQNRMQAFSRGFRHEALSRVQSYGPEEPKQGSR
KQSEAHLAPHIQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESFGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWETPSAVEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIVTK
LRSGH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatggtccgtggtggagaagctcaaaatggagaaacgcccatgcagggaggag
aacactgactcaagagaggcccggcatgccgccgacgagtctgagaatggaagcagctcg
gagagcgagtcggaggagcagcagcaccggagggttccggtgagcaccagcggctgcaag
aggagagagcccttggctatcaccaaaccccaccgtcagctctgccgctcgccgtgcctc
gaccggcccagtttttcccagagcagcaccgtgcaggattttcgcgacgatgacaccagc
gcagcaccggggatcaaacttgccagtggaagagagtaccagtcaaagatggagtttgct
ctgaagttaggctattcgggagagcaggtggaggtggtgctcaacaagctgggagccacg
gcgctgatcaacgacgttcttgccgagttggttcgactcggaaacaaagtggagcctgaa
cttcaaccttgcagcagcacgttcacatcaatatcacggtccccttgtgttaaagaagct
gttagtcctgaagtttcagtggaagaggatcctgtggaagtgtatgataacctcagacct
attgtcattgatggttcaaatgtggcgatgagccatgggaacaaagaggtattctcttgc
cgtggtatccagcttgctgttgagtggtttttggagaaagggcataaagacatcactgtg
tttgtcccagcctggagaaaggagcaatcaagacctgacgccctcatcacagatcaggaa
atcctgcgcaagctagagaaagagaaaatcctggttttcaccccgtctcgaagagttcag
ggcagaagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgat
ggaattattgtgtcaaacgacaactacagggacttgcagaacgagaagccagagtggaag
aagtttatagaagagcgcctcctgatgtattcatttgttaatgacaagttcatgccacct
gatgatccattgggaagacatgggccaagcttagaaaattttcttcgcaagagacctgtt
gttccagagcacaaaaaacagccttgcccctatggaaaaaagtgcacatatggacataag
tgcaaatactaccatcccgagcgtgtcaaccaaccgctgcgctctgtggctgatgagctg
cgagcctttgccaaattgtctgcagtaaaaacaatgagtgagggggctttagctaaatgt
ggcactggcccagcagctgtaaagggcgacagcagttctgaagccaaacgcgtggcaccc
aaacgtcagtccgatcccagcattcgctcagtggcctgtgaacctccagaggcgctctct
gttgttcggaagtctgagacaaattcagtgccttccctcgtgtctgctctcagtgtgccc
accatgcagcctgccaagagccacgcagctggagccttgaacacacgatctgccagcagc
ccggttccaggttctctgcagtttgctcacaattccctggagcacatgtccagtgtacaa
taccctcctattttagtcactaacagtcacggcgcctctgtaacgtacggtgaacagttc
cccaagtatgactcagttagcgaccacggatactattcactccacagtgatttttcaaac
atgagcatgagcagcatgcaaaacgttgacagtttctgtagcatggagcacgagcatgtg
tatcagagaaatcctagccactgccctgaatcctgcctcagccactccaacagtgactcg
ttctcctcgtacggtgacatgtacccaagctctgttgacagcagcctggaggagagcatc
aaagggcagcagcaagctcctgcccaaaataggatgcaggccttctcccgtgggtttcgt
catgaagcgctgtcgagagtacagagttatggaccagaggagccgaaacagggttcccgc
aaacagtccgaagctcacctggcaccacatatccagcatgctgcagtgggagctcgatct
agctgtcccggagactacccactcactcagaatgtcctcccgcctttatcctcgcagcca
accaggtctctaggtatgactcgaatggacagcatatcggactcgaggctgtatgacagc
aacccaatgagacagaggcgaccgccgctgtgccgcgagcagcacgcaagctgggaccct
ctgccttgtgggaacgagtcctttggatatcattcatatccactcagtaacagcttgatg
ccatgttgcgaacgggtgatggtccgcagcatgccagacaaaatggaacaaatctggaac
tcgccgtgggagaccccatctgcagtcgaacaccaagagcgttacgttattccagatcac
cagtatcagacgtacaggaacctttgtaatatctttcctgcttacatagtccactcagtc
atggagaagaaccctcatttgacagatccacaacagctggctgctgtcattgttacaaaa
ctgaggtcgggacactga
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