Nematolebias whitei (Rio pearlfish): 119420140
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Entry
119420140 CDS
T08042
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119420140
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119420140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
YVC1_C
Motif
Other DBs
NCBI-GeneID:
119420140
NCBI-ProteinID:
XP_037543447
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Position
14:37999215..38008117
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AA seq
1021 aa
AA seq
DB search
MEKLTPEQWREIMNKKMRFPPELLNAIQEGRIELLSGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGSEDAMDALLLGVKFDFRQIHEALLVAVDTNQPTVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHGIPWPHKISCTCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLSAFSLSKELRKLSQKEPEFKPQYL
SLEELCQEFAVELLGMCRNQSEVSTILNSCGDESRDSLDEQAFEEGIPTLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGTLSGWRGSRTAWKLLVSIGIFFTMPFLCLIYWIAPKSKPG
QLLKIPVIKFLLHSASYLWFIITLLGESITMEMYRDKFASREQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFSLRVLILLKGYFLCQDQSSNEDCVYF
TQTVREEWRQEDPQLLSEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPRLGRFNETFKFLYWTMFGVANQDYVDMPQYVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGIFRRICCCCKSNSEQKYPPLASMSSDKGTEDSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELNKAVSRMHGEMKVIQQLLVAEGHVSSDALSRD
GTSVLGKYIIGAKNNFRGFSSRQDDKNTSLKVTVHHGGERADSDAQQETDKQLSQLDECE
ETPTQDCEVAKMEEGRAKSKQGDENREHEEENQSENGDEEEAAGGRSLETVEEKAESTQG
EADKSEEEFNSGSKVTDTHTETTPEHVEGATVSCETTDTKKIIKFNDMELKEREVGWTKG
KRFGSNVRERDGQNGNKEVVPSPTGSSSSHDTGFGSQEGVGAIDGSEPLNTETCWVRMSQ
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactcacgccagaacaatggcgcgagataatgaacaagaagatgcgcttccct
ccggagctcctcaacgccatccaggaagggaggatcgagctactgagtgggctgctgaag
acgggagacggcatcatccgccagctggatgaatctgaggatcgccagtggagggaggct
ctcaatctctccatccgcctgggcagcgaggatgccatggacgccctcctgctgggggtc
aagttcgacttcaggcagattcatgaggccctgctggtcgctgtggacaccaaccagccc
acagtggtgaagcgtctgttggatcgtttggaccaggagaagggcaacaaaatggatgtc
agatccttctcccaggctatttttgaccgctccattgacaactcccagtttgcccctggt
gtgacccctttgaccctagcctgtcagaaagacctgtatgacatagtcaccatgctcacc
cagaaaggtcacggcatcccgtggccacacaagatctcctgtacctgtctggagtgtcgc
aatggtcggcagtacgacctgctcaagttctccttgtctcgcatcaacacctatcgtggc
atcgccagccgagcctacctgtccatcacctctgatgatgccatgctcagcgcttttagt
ctcagcaaagagctccgcaagctgtcacaaaaggagcccgagttcaagcctcaatacctg
agccttgaggagctctgtcaggagtttgccgtggagttgttggggatgtgccgcaaccag
agcgaggtttccacaatcctgaacagctgcggagacgagagtcgggattccttggacgag
caggcgtttgaggagggaatacccactctgtctcgtttgaggctcgctgtcaactacaac
cagaagcagtttgtagcgcacccgatctgccagcaggttctgtcatcgatttggtgtggg
actctatcaggctggagaggcagcaggacagcctggaagctcttggtctccattgggatc
ttttttaccatgccctttctttgcctcatttactggatagcaccaaagtcaaagcctgga
cagttgcttaagattcctgttattaagttcctccttcattctgcatcctacctgtggttt
atcatcactttgctcggagagtcaataaccatggagatgtaccgggacaagtttgcttcc
cgggagcagaacatcctgcacagctccttccacatggtgtgggtggtcggcttcttctgg
tatgagtgtaaagaggtgtggatcgaaggactacgcagttacttcctagactggtggaat
tgtctggacgtgatggtgctcagcatgtacttggcgtccttttcactgcgagtgctcatc
ctgctcaaaggctacttcctgtgccaggatcagagcagcaatgaggactgcgtctacttc
actcagactgtgcgtgaggagtggcgtcaggaggacccgcagctgctttctgaggtgctg
tttgctgtgaccagcatgctgagcttcacccggcttgcatacatcctgccagcccatgag
tcactgggaacgctgcagatctccatagggaagatgattgatgacatgatgagatttatg
ttcatactgatgataatcgggacggccttcctctgtggcatcaacaacgtctacgttcct
tacgtcatctctccacggcttggcagatttaatgagaccttcaagttcttgtactggacc
atgtttggggtggccaaccaggactacgtggacatgcctcagtatgtcttggcggagttt
gtgggaaggattctttacggtatcttcacccttgtcatcgtcattgtcctcctcaacatg
ctcattgctatgatcaccaactcctttcagaaaattgaggatgacgcagatgttgaatgg
aaatttgccaggtcgaagctgtacctcagttacttcagagagggcctcactatgcctgtg
cctttcaacatcattccttctcccaaagccgtgttttacattttaaggggcatcttcaga
cgaatctgctgctgctgtaaatctaattcagagcaaaaatatccccctctagcctctatg
tccagcgataagggcaccgaggacagtcagctgccttaccggcagcaagtgatcagagct
ctggtgcagcgctacatcgagtcagcccgcagggagtttgaggagaccaaaagaaaagac
attggaaataggatcaccgagctgaacaaagcagtctccaggatgcacggtgaaatgaag
gtgatccagcagctgctggtggctgaaggacacgtttcaagcgacgctctgtccagagat
ggcacctctgttctggggaaatacatcattggggccaagaacaacttcagaggtttcagc
agcagacaggacgacaaaaacacatccctcaaagtgaccgtgcaccacggaggggaaagg
gccgattcagacgcacaacaggagacggacaaacaactgagtcagctggatgagtgtgaa
gaaacgccgacgcaggactgtgaggtggccaagatggaggaagggcgagcgaaatccaag
cagggagacgagaacagggagcacgaggaagaaaatcaaagtgaaaatggtgatgaagag
gaggccgctggagggagaagtttagagacagtagaagagaaagcggagagcacacagggt
gaggcagacaagagtgaagaggagtttaactcggggtcaaaggtgacagacacacacact
gagacgacgcccgagcacgtggagggcgccacggtcagctgtgaaacgacagacaccaag
aaaataatcaagttcaacgacatggagctgaaggagagggaggtgggatggacgaagggg
aaaaggtttgggagcaatgtgagggagagagacggacagaacggaaacaaggaagtggtt
ccgtctccgacaggaagcagcagctcacacgacacgggcttcggctctcaggagggggtc
ggagccatcgacgggagtgaacccttaaacacggagacttgctgggtcaggatgtcccag
acctga
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